Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00299 ATGGCCACTCCCGTTTTCCGGTGGTCTGTTGTCTTCTTCTTCCCTGTTCTTCTTTTTCTGGCGGTCTCCTCCGCTGCCGCAGCTTCATCTTGGACTGTGAAGTATCTGCCTGGATTCTCAGGTCCTCTTCCATTTGAGCTCGAAACTGGATATGTGGGAGTGGGCGATTCGGAGGAAGTTCAGCAGTTTTATTACTTTGTCAAGTCCCAAGGAAACCCCCAAACTGATCCTCTGATGACTTGGTTTACTGGCGGCCCTGGTTGCTCTGCTCTCTCTGGACTTGCCTTTGAAGTTGATTCGCCTGTGGGCACTGGATTTTCGTATAGTCGAACTCTAAAAGGTTCTAAGAAAGGAGATTTTGGACAAGTTCAACAAAACCATCAATTTTTGAGAAAGGGTTACATATTGGGAAATCCAGTCACGGTACGTAAAACAAATGATAATTCCAGAGTTCCATATGCTCATAGAATGAACCTCATCCCCACTCAACTGTACGAGTTATTGAGAAGCAATTGCAAAGGAGAATATGAGAACATTGAGCCAGATAACATGAAGTGCATGAAACATGTAGCAGCCTACAAAAAGTGTGTGAGCAGAATCAATCAATGGTGTATTACGTGCCCTTTTTGTGAGGATGTTTCCTCAGCGCCAAATGATGATAAATTTGGACGGCGGAGATCTCTCTTCAACTCCTCTGAAGAACAACTGCTGCTTGCTCCAAGAGTGTTGCCTCCGCCTCTTCTCTACTGTCAAGAGTATAAATACTTCCTTAGTTATTATTGGGCTAACGATTGTCGAGTCAGGAAAGCACTTCACATACGCGAGGGAACTAAAGGAGAATGGATAAGATGTCAGAGTCGTAAAGATTATCAATACGATATTATGAACTCGGTTCCTTACCATGCAAAACTCAGTTCTAAAGGATATCGATCTTTGATTTTTAGTGGAGATCATGATATGATGGTGCCGGTTATAAATACAGCAGAGTGGATCGAATCTCTGAATTATCCTGTTGTTGATAATTGGAGAACTTGGCTTGGGATGGATGATCAAGTATTGGGATACACTACAACCTTTGCGAACAACATGACATTTGCAACAATTAAAGGTGGAGGGCACACGCCGGAATACATGCCATACGAAAGCGACGGTTACATATTGGGAAATCCAGTCATTGTACGTAAAACAAATGATAATTCCAAAGTTCCATATGCTCATAGAATGAACCTCATCCCCACTCGACTATACGAGTTATTGAGAAGCAATTGCAAAGGAGAATATGAGAACGTTGAGCCAGATAGCATGGAGTGCATGAAACGTGTAGCAGCCTTCAAAAAGGACGTTTCTTCAACTCCTCTGAAGCACAACTGCATCTTGCTCCAAGAGCGTTGCTTCCGCCTCCTCTCTACTGTCAATGGATTTTTTATTATATTTGTCATATATACGTGGATCAAATCTCTAAATTATCCTGTTGTTGATAATTGGAGACCTTGGTTTGCGATGGATGATCAAGTATTCGGAGATCTTCTCATCTTCTCCCAAATAATTTCAAGCCCGCCCCCACCACGACCACGATCCTCCGCCGCCGTATACCCGTCTTGTTGGCTGTTCTTTTTGAGGTGGTCTCCGCTGCCACAAGGCCTTATTAGGGACCGTCAGGTCTCTGCCGGGATTCTCAGGTTGGATAAAATTATTCCATTATCGCCAAGACACCCACGCCAGAAGCAAGCGCTCGCTTCCACACCTCCACCGCCGTTGACTAACCGCTCCACCATGCCCACCTTCTTCTTCCGCTTCTCTATTCTTTTTCAGATCATCTCCGCCGCCGTCGTTGCAGGGTCGCATTCGAAGGTGGAGTTTCTGCCGGGCTTCCCAGGTCGTCTTCCCTTCGAGCTGGAAACAGGATATGTGGGCGTCGGGGAATTGGAGGAGGTGCAATTGTTTTATTATTTCGTGAAATCTGAAGGGAATCCCAGGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGCTGCTCGGCTTTTACTGGACTCGCCTTTGAAATTGGTCCTATAAATTTCAAGCTTGAGCTATACAATGGGAGCTTGCCTCAGCTATTCTGGAACCCTTATTCATGGACAAAGAAATCGAGCATAATATTCGTAGATTTGCCGGTGGAAACTGGATTCTCGTACGGCACAACCCCACGATCTCTGGAGGCAGGAGATTCCCGCGTTGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTAGTTGATCATCCAGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCTGGGATGGTAATTCCAGCTATTGCTCATAAAGTTTCAGAAGAAAATAAGCGTGGTTTATTGCTGCTAGATCTACAGGGATATATATTGGGAAATCCAGTCACCATTCGTAATTCAAATACCAATTTTCAAATTCCTTATGCTCATAAAATGGCTCTTATATCCGATGAATTATTCGAGTCCTTGACCTCTAGTTGCAAGGGAGAGTACGTGAATATTGATCCGAACAATGTGGATTGTTTAACACATTATAAAACGTACCAAAAGTGTGTTTCAAATATCGAGAGAGCTTCAATCTTGTTGCCAAAATGTACGTTTATTTCTCCGAAGCAACGAGGAGGTGGAGATGATGGGAGATTGCTATACGACACCTCCGAATTGTCCCTTGATCCCGAGCCATCGCTTTCTTATCTCGATTGTCCGACCTATAAATTCAAACTTGCTACTTATTGGGCGAACGACGATCAAGTTCGAAAAGCACTTCGCATCCGAGAGGGAAGCGTGGGAGAATGGATGAGATGTAATGTTAGGGACAGTTACAAGTATGATTTCCAGAGTGCTTTCCCTTATCATGTGGACCTTAGTTCTAAAGGCTACCAGTCTTTGATCTATAGCGGGGATCACGATATGATGGTACCGCATATGGACACTGAAGCATGGATTAAAAAATTAAATTACTCTATTGTCGATGACTGGAGACCTTGGTTTATCCAAAACCAAGTAGCCGGATATACAAGAAGATATGCAAATAATATGACATTTGCAACCATAAAAGGTGGAGGGCACACAGCAGAATACACACAAAAAGAATGCAGTATAGTGTTTAGTAGATGGATTAGTGGAGAACCCTTGTAG 3165 43.57 MATPVFRWSVVFFFPVLLFLAVSSAAAASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQQFYYFVKSQGNPQTDPLMTWFTGGPGCSALSGLAFEVDSPVGTGFSYSRTLKGSKKGDFGQVQQNHQFLRKGYILGNPVTVRKTNDNSRVPYAHRMNLIPTQLYELLRSNCKGEYENIEPDNMKCMKHVAAYKKCVSRINQWCITCPFCEDVSSAPNDDKFGRRRSLFNSSEEQLLLAPRVLPPPLLYCQEYKYFLSYYWANDCRVRKALHIREGTKGEWIRCQSRKDYQYDIMNSVPYHAKLSSKGYRSLIFSGDHDMMVPVINTAEWIESLNYPVVDNWRTWLGMDDQVLGYTTTFANNMTFATIKGGGHTPEYMPYESDGYILGNPVIVRKTNDNSKVPYAHRMNLIPTRLYELLRSNCKGEYENVEPDSMECMKRVAAFKKDVSSTPLKHNCILLQERCFRLLSTVNGFFIIFVIYTWIKSLNYPVVDNWRPWFAMDDQVFGDLLIFSQIISSPPPPRPRSSAAVYPSCWLFFLRWSPLPQGLIRDRQVSAGILRLDKIIPLSPRHPRQKQALASTPPPPLTNRSTMPTFFFRFSILFQIISAAVVAGSHSKVEFLPGFPGRLPFELETGYVGVGELEEVQLFYYFVKSEGNPRTDPLLFWLTGGPGCSAFTGLAFEIGPINFKLELYNGSLPQLFWNPYSWTKKSSIIFVDLPVETGFSYGTTPRSLEAGDSRVVHHSIQFFKKWLVDHPEFISNPFYVGGDSYSGMVIPAIAHKVSEENKRGLLLLDLQGYILGNPVTIRNSNTNFQIPYAHKMALISDELFESLTSSCKGEYVNIDPNNVDCLTHYKTYQKCVSNIERASILLPKCTFISPKQRGGGDDGRLLYDTSELSLDPEPSLSYLDCPTYKFKLATYWANDDQVRKALRIREGSVGEWMRCNVRDSYKYDFQSAFPYHVDLSSKGYQSLIYSGDHDMMVPHMDTEAWIKKLNYSIVDDWRPWFIQNQVAGYTRRYANNMTFATIKGGGHTAEYTQKECSIVFSRWISGEPL 1054
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1226342 1237414 - CmaCh09G002990.1 Cma09g00299 300304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00299 1054 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 609 1052 - -
Cma09g00299 1054 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 132 380 - -
Cma09g00299 1054 Gene3D alpha/beta hydrolase 612 881 IPR029058 -
Cma09g00299 1054 Gene3D alpha/beta hydrolase 26 98 IPR029058 -
Cma09g00299 1054 Gene3D alpha/beta hydrolase 381 470 IPR029058 -
Cma09g00299 1054 SUPERFAMILY alpha/beta-Hydrolases 29 375 IPR029058 -
Cma09g00299 1054 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 383 458 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 95 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 383 458 - -
Cma09g00299 1054 Gene3D alpha/beta hydrolase 122 380 IPR029058 -
Cma09g00299 1054 PRINTS Carboxypeptidase C serine protease (S10) family signature 716 726 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PRINTS Carboxypeptidase C serine protease (S10) family signature 751 776 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PRINTS Carboxypeptidase C serine protease (S10) family signature 703 715 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PRINTS Carboxypeptidase C serine protease (S10) family signature 1022 1035 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 Gene3D - 909 1054 - -
Cma09g00299 1054 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 18 95 - -
Cma09g00299 1054 Pfam Serine carboxypeptidase 37 98 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 Pfam Serine carboxypeptidase 622 1051 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 Pfam Serine carboxypeptidase 132 382 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 98 132 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 609 1052 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 SUPERFAMILY alpha/beta-Hydrolases 382 507 IPR029058 -
Cma09g00299 1054 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 98 132 - -
Cma09g00299 1054 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 132 380 IPR001563 GO:0004185|GO:0006508
Cma09g00299 1054 SUPERFAMILY alpha/beta-Hydrolases 618 1053 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01777 Cma09g00299 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00299 Cma-Chr9:1226342 Cma11g00930 Cma-Chr11:4884425 5.19E-48 dispersed
Cma17g01330 Cma-Chr17:8956352 Cma09g00299 Cma-Chr9:1226342 3.00E-58 transposed
Cma01g01777 Cma-Chr1:11913439 Cma09g00299 Cma-Chr9:1226342 1.31E-15 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00299 K16296 - cit:102630827 577.4