Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00311 ATGGCGCCCTCGTTTGATTGGTGGGGAAAAGACACTCGCAGAGGAACCCCTGTTGTTGTTAAGATGGAGAATCCAAATTGGTCGATGGTTGAGCTCGAGGGTCCGTCGAAGGATGATTTTCTCATCGCGGGTGAGTCGCCAACGGGCCGGACCAGAGAGAAAGCCCGAGGGAAAAACGCTAAACAACTCACGTGGGTCCTCCTCCTCAAGGCCCACAAGGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCAATGGTGGACCTTGTCGCCACTGTAAGACGCCGCGTTGCTTCGGGCCGGACTGACGAGGACGACGCCGACGCCGACAATGACGTCACTGGTAAAGAGAACCCGACAGTGAAAACGAGATTCTATTCTTGTATCAAGGTGTTTTTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGGTGGCGGCCTTCTTCAAGGGCTGGCATTTCGGTACTCCAAACTTTCAATTGGATTATCTCTGGGCATCACCTTGGGGTTTCAAAGGAGCTTTTGGTTGGATTTACTCTCAGTGGGTATCGATTCGAGTGGATTATTTAGCTCCTCCTCTGCAATTCTTAACCAATGCCTGTGTCGTACTGTTCATCAGTCAAAGCTTGGATCGTTTAATCTTATGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATTCAACCAGTTCTTAAACCTGGAGATGAAGACCTTGAATCCGGCGAGAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAATTTGGACTGGCCAAAAACCAATCTGTTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACCCAATTGCTGATTAAAGAGGAGGTTCATAAATGGCAGCAAGAAGGTGCCAACATTGTTTATCGTCATCGAGTCATTCGAGATGGTTACAAGGCTGGCAACCTCAAATCCGCTATGAATTGTAGCTATGTCAAAGACTACGAATTCGTTGCCATTTTCGACGCTGATTTTCAACCGACACCCGATTTCCTTAAAAGAACTGTTCCTCATTTCAAGGACAATGAAGAGCTGGGGTTGGTTCAAGCAAGGTGGTCTTTTGTGAACAGGGACGAGAACTTGCTAACCAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTCAACAGTGTCTTCCTCAACTTCTTTGGCTTCAATGGCACGGCTGGTGTGTGGAGGATCAAAGCTCTTGAGGACGCCGGTGGGTGGTTGGAAAGGACCACCGTCGAGGACATGGATATCGCCGTTCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAACGACGTCGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGCCCAATGCAGTTGTTTCGCCTTTGTCTGCCTGCTATTATTCGATCGAAGATTAGTGTATGGAAGAAGTTCAACTTAATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCGTTTACACTTTTCTGCATAATTCTCCCGATGACAATGTTCGTTCCCGAGGCCGAGCTACCCTTTTGGGTTGTCTGCTATATCCCAGCCATGATGTCGTTTCTAAACATTCTGCCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACAATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTCGGTAGTGCCTACGAATGGGTTGTTACGAAGAAATCTGGCCGATCCTCGGAGGGTGATCTCGTCTCCTTGGTAGAGAGAGAGCAGAAGCATCAGAGAGGGACTTCGGCGCCCGACCTAGAAGAGATGAAGGAAGAATTTGAGAAGCAAGAGCAGAAAGGCTCCTTGCGAAAGAAGCACAACCGAATATACGTGAAAGAGCTCGCATTAGCTTTCCTCCTCCTAACTGCCTCGGCACGGAGCCTTCTGTCTGCACAAGGAATCCATTTCTACTTCTTGTTGTTCCAGGGGATCTCGTTCCTGCTGGTCGGGTTGGACTTGGTCGGCGAACAGATAGGTTGA 2115 47.38 MAPSFDWWGKDTRRGTPVVVKMENPNWSMVELEGPSKDDFLIAGESPTGRTREKARGKNAKQLTWVLLLKAHKAAGCLTSIGSAMVDLVATVRRRVASGRTDEDDADADNDVTGKENPTVKTRFYSCIKVFLWLSVLLLGFEVAAFFKGWHFGTPNFQLDYLWASPWGFKGAFGWIYSQWVSIRVDYLAPPLQFLTNACVVLFISQSLDRLILCLGCFWIRFKKIQPVLKPGDEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPKTNLLIQVLDDSDDPTTQLLIKEEVHKWQQEGANIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPFWVVCYIPAMMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGTSAPDLEEMKEEFEKQEQKGSLRKKHNRIYVKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLVGEQIG 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1283079 1286035 - CmaCh09G003110.1 Cma09g00311 300316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00311 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 462 IPR029044 -
Cma09g00311 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 526 IPR029044 -
Cma09g00311 704 Pfam Glycosyl transferase family group 2 339 535 IPR001173 -
Cma09g00311 704 PANTHER - 6 703 - -
Cma09g00311 704 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 703 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma09g00311 Cma12g00615 CCT
Cma01g01758 Cma09g00311 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00311 Cma-Chr9:1283079 Cma09g00534 Cma-Chr9:2381792 0 dispersed
Cma01g01758 Cma-Chr1:11830948 Cma09g00311 Cma-Chr9:1283079 0 wgd
Cma12g00615 Cma-Chr12:3241272 Cma09g00311 Cma-Chr9:1283079 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00311 - - csv:101204215 1320.45