Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00367 ATGTGGCAGAGGGATGGCCAGCTGGCAGATACGGAAAGCTACAAACGGGTTTTGAAGATTCTTGCTACTACCCAGCCATGGAAACTGCAGCAACGGTGTAAAACGAAGTCTGGGAAGACGGCAGCCATGGCATTTCCCGTCGAGCTCGTTATTCTGGGTTTTCTCTTCTGTGCTACCGTCGGCGTGGTCAACTCCGATGATGATCTTAAGCTATACATGTTTTCTTGTGATGAAGGAGCATCGTTGTTGGACATAAAGAAATCATTCAGGGATGTTGATAATGCTCTATACGATTGGACAAGCTCACCTTCATCGGACTATTGTATATGGAGAGGTGTCACCTGCGACAATGACACTCTCAATGTCTTATCTCTTAATCTTTCAGGCCTCAATCTTGATGGGGAAATTTCTCCTTCAGTCGGCAACCTCAAAGGCCTGCAAACTTTGGATTTGAGGGGGAATAGCCTTTCTGGGCAAATTCCAGACGAGATTGGTGACTGTTCTTCATTAACCAATCTGGACTTATCGTTTAATGAGATTTATGGAGACATACCCTTTTCCATTTCGAAATTGAAGCAGCTGGAAATGCTTGTTCTGAAGAACAATCGACTCATTGGGCCAATCCCATCGACCTTATCTCAGATTCCAAACTTGAAGGTTTTGGACCTAGCACAGAACAATCTCAGCGGGGAAATTCCAAGACTAATTTACTGGAATGAAGTGTTGCAATATCTTGGTCTGCGCGGCAACAATTTGGTGGGCGCACTGTCTCCAGATATGTGTCAGCTCACTGGCTTATGGTATTTTGATGTGAGAAACAACAGTTTAACAGGCTGCATACCTCAAACCATAGGCAACTGCACGGCCTTCCAGGTCCTAGACCTGTCGTATAATCATCTCACTGGAGAGATACCATTCAACATTGGTTTTCTTCAAGTTGCCACGTTGTCCCTGCAGGGTAATCAGCTATCAGGTCCCATCCCACCGGTAATCGGTCTGATGCAGGCGCTTGCCGTGCTAGATTTGAGCTGCAACATGTTAACTGGTCCAATCCCTTCTATTTTAGGGAATTTGACTTATACTGAGAAACTGTACTTGCATAGCAACAAACTCACTGGGTCCATCCCGGCAGAGCTCGGGAATATGACGAAGCTCCATTATCTCGAATTGAACGATAATCATCTTACTGGGAATATTCCAGCCGAGCTCGGGAAACTCACCGATTTGTTCGATCTAAACGTTGCTAATAACAATCTTGAAGGTCCTATCCCTGATAATCTTAGCTCTTGCACAAATCTCAACAGCCTAAATGTTCATGGCAACAAGTTGAATGGAACTATCCCGCCGTCTTTCGAGAAGCTAGAGAGTATGACGTACTTGAATCTCTCCTCTAATGTTCTACGAGGTCCTATTCCAGTTGAGCTATCTCGCATTGGCAATCTCGACACGCTAGACATCTCAAATAACAAAATTAGCAGCACGATTTCTTCATCGTTTGGCGATCTCGAACATCTCCTAAAGCTGAATTTAAGTAGGAATCAATTAACGGGGTCTATTCCAGCTGAATTTGGCAATCTAAGGAGTGTAATGCAAATAGATATTTCACACAATCAGCTCTCTGGGATCATTCCTCAAGAACTGAGTCAACTTCAAAACCTGTTCTCCTTGAGACTTGAAAACAACAATTTATCGGGGGACGTGATGTCGCTGATTAGCTGCCTAAGCCTTACCGAATTAAACGTATCTTACAACAATCTGGGTGGTGATATTCCCACAAGCAACAACTTTTCTAGGTTCTCGTCTGACAGAGTTAAGCGACTCTTCCATAAAAATAGTCGAATGACAATATCCAAAGCTGTTATCCTGGGAATTGCTCTTGGTGTCATTGCGATCCTTCTGATGATCCTTCTGACAGTGTGCCGTCCAAACAACACAATACCTTTTCCAGAAGGATCACTTGATAAACCAGTTACTTACTCAACTCCCAAGCTAGTGATGCTTCACATGAACATGGCACTTCATGTGTATGAGGATATTATGAGGATGACTGAAAATTTGAGTGAAAAGTACATTATTGGATATGGAGCTTCAAGCACAGTCTACAAATGTGTACTCAAGAACTGCAAACCTGTGGCTATCAAAAAGCTCTACTCTCACCAGCCACATAGCATGAAGGGATTCGAGACCGAACTCCAAACCGTGGGTAGCATCAAGCACAGAAATCTGGTCAGCCTCCAAGGATATTCCTTATCTCCCTCTGGGAATCTCCTCTTCTATGACTATATGGAAAACGGCAGTCTTTGGGATCATCTGCATTGCTCTAGCTCTACCAGGAAGAAAAAGCTGGACTGGGACACTCGGCTCAATATTGCTCATGGAGCAGCTCAAGGGCTATCATATCTACACCATGATTGTAGCCCTCGCATTATCCACAGGGATGTCAAGTCATCAAACATTCTGCTAGACAAGGATTTTGAAGCTCATCTCACTGATTTCGGTATAGCCAAGAGCTTATGTACCTCGAAGACTTATACGTCCACTTACATCATGGGAACTATTGGATACATTGATCCGGAGTATGCTCGTACTTCTCGACTTACCGAAAAGTCTGATGTTTACAGCTTTGGCATTGTGTTACTTGAATTGCTCACAGGAAGGAAAGCTGTGGACAATGAATCAAATCTCCACCAATTGATCTTATCAAAAGCAGCCAACAATGCTGTAATGGAGACAGTTGATCCTGAAATAACTGCAACTTGCAAGGACCTTGGAGCTGTAAAGAAGGCGTTTCAGCTTGCTCTCCTTTGCACCAAGAGGCAGCCATCCGATCGACCAACGATGCACGAAGTAACGCGCGTCATTGAGAGTCTTCTGCCCTCTGCCACAGTTCCAAAACAAACACCAACCATGCCCCCATCTGCAAAATCCCCTTGCTACAGGGATGAGTATACAAATCTAAAAACGCCGCACGTGCTGAACTGCCCATCCATGAGCACGTCAGATGCTCAGCTTTTCCTCAAGTTTGGAGAGGTTATATCACAAAACAGTGAGTAA 3054 44.24 MWQRDGQLADTESYKRVLKILATTQPWKLQQRCKTKSGKTAAMAFPVELVILGFLFCATVGVVNSDDDLKLYMFSCDEGASLLDIKKSFRDVDNALYDWTSSPSSDYCIWRGVTCDNDTLNVLSLNLSGLNLDGEISPSVGNLKGLQTLDLRGNSLSGQIPDEIGDCSSLTNLDLSFNEIYGDIPFSISKLKQLEMLVLKNNRLIGPIPSTLSQIPNLKVLDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGALSPDMCQLTGLWYFDVRNNSLTGCIPQTIGNCTAFQVLDLSYNHLTGEIPFNIGFLQVATLSLQGNQLSGPIPPVIGLMQALAVLDLSCNMLTGPIPSILGNLTYTEKLYLHSNKLTGSIPAELGNMTKLHYLELNDNHLTGNIPAELGKLTDLFDLNVANNNLEGPIPDNLSSCTNLNSLNVHGNKLNGTIPPSFEKLESMTYLNLSSNVLRGPIPVELSRIGNLDTLDISNNKISSTISSSFGDLEHLLKLNLSRNQLTGSIPAEFGNLRSVMQIDISHNQLSGIIPQELSQLQNLFSLRLENNNLSGDVMSLISCLSLTELNVSYNNLGGDIPTSNNFSRFSSDRVKRLFHKNSRMTISKAVILGIALGVIAILLMILLTVCRPNNTIPFPEGSLDKPVTYSTPKLVMLHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKKLYSHQPHSMKGFETELQTVGSIKHRNLVSLQGYSLSPSGNLLFYDYMENGSLWDHLHCSSSTRKKKLDWDTRLNIAHGAAQGLSYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCTSKTYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNESNLHQLILSKAANNAVMETVDPEITATCKDLGAVKKAFQLALLCTKRQPSDRPTMHEVTRVIESLLPSATVPKQTPTMPPSAKSPCYRDEYTNLKTPHVLNCPSMSTSDAQLFLKFGEVISQNSE 1017
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1525795 1534372 + CmaCh09G003670.1 Cma09g00367 300372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00367 1017 Gene3D Ribonuclease Inhibitor 313 398 IPR032675 -
Cma09g00367 1017 Gene3D Ribonuclease Inhibitor 495 618 IPR032675 -
Cma09g00367 1017 Gene3D Ribonuclease Inhibitor 399 494 IPR032675 -
Cma09g00367 1017 Gene3D Phosphorylase Kinase; domain 1 655 761 - -
Cma09g00367 1017 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Cma09g00367 1017 Pfam Protein kinase domain 689 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00367 1017 ProSiteProfiles Protein kinase domain profile. 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00367 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Cma09g00367 1017 Gene3D Transferase(Phosphotransferase) domain 1 762 968 - -
Cma09g00367 1017 SMART LRR_typ_2 502 525 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 382 406 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 478 501 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 263 287 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 215 239 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 143 167 IPR003591 -
Cma09g00367 1017 SMART LRR_typ_2 526 550 IPR003591 -
Cma09g00367 1017 Pfam Leucine rich repeat N-terminal domain 77 116 IPR013210 -
Cma09g00367 1017 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Cma09g00367 1017 Pfam Leucine rich repeat 336 395 IPR001611 GO:0005515
Cma09g00367 1017 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Cma09g00367 1017 SUPERFAMILY L domain-like 312 598 - -
Cma09g00367 1017 Pfam Leucine Rich repeat 572 589 IPR001611 GO:0005515
Cma09g00367 1017 ProSiteProfiles Leucine-rich repeat profile. 217 239 IPR001611 GO:0005515
Cma09g00367 1017 CDD STKc_IRAK 692 957 - -
Cma09g00367 1017 SMART serkin_6 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00367 1017 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 72 1004 - -
Cma09g00367 1017 SUPERFAMILY Protein kinase-like (PK-like) 663 953 IPR011009 -
Cma09g00367 1017 SUPERFAMILY L domain-like 75 311 - -
Cma09g00367 1017 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 1004 - -
Cma09g00367 1017 Gene3D Ribonuclease Inhibitor 239 312 IPR032675 -
Cma09g00367 1017 Gene3D Ribonuclease Inhibitor 76 238 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00367 Cma-Chr9:1525795 Cma19g00324 Cma-Chr19:3070943 0 dispersed
Cma01g01701 Cma-Chr1:11576522 Cma09g00367 Cma-Chr9:1525795 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68787 PF00069 Pkinase 6.50E-46 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00367 K20718 - csv:101214398 1741.86