Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00392 ATGCTTAGCGAAGACCAAATCCTTTTATTCCCAGTTAGCTTCTCAGATACCACGACAGATTTGTTCATGGCGAAAACGGCGTCCTGTAGCGACGATATATGCAACTCGTTTTTACTTCTTCTGGTTTTGTCTGTTCCGGCATCGACGGTGGCCTTGTCGTTCGGGTTTTACGCTGCCACGTGTCCTGCGGCGGAGTTTATGGTCCGGAATATCGTTAGATCGGCTTCCTCCGTTGACCCCACCATTCCCGGCAAGCTCCTCCGACTGCTCTTCCATGACTGTTTTGTTGAGGGCTGTGACGCTTCTGTATTGCTGCAAGGAAATGGGACGGAAAGAACTGACCCAGGAAACAAGTCTCTTGGAGGCTTTGAAGTTATTGATTCAGCTAAGAGAAATCTTGAATTTTTCTGTCCCCAAACTGTCTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCACCGGCGGGCCCTTCGTCCAAGTCCCGACCGGCCGGAGAGACGGAAAAATATCGGCGGCGTCAAACGTCCGACCAAACATTGTCGACACAAGCTTTTCAGTCGACCAAATGATGACTCTCTTCTCATCAAAAGGGCTGTCGGTGGACGATCTTGTCGTCCTTTCTGGGGCCCACACCATCGGAACGGCTCACTGCAACGCCTTCAGTGACCGCTTCAGAAGAGATCCAAACGGCCGAATGAGCCTCGTCGACGCCTCTCTAGACGGCTCATATGCCAACGAGCTTATGCGGCGGTGCTCAGCTGGAGCCGCCTCCGCCGTCACCGTCGAAAACGATCCGGCGACGGCGGCTGTCTTCGACAATCAGTACTACAGAAACATTCTGTCGCACAAAGGGCTGTTTCAGTCGGATTCTGTTCTGATTAGCGACGGCCGGACCAGGGCCCGGGTGGAGAGCTTTGCAGAGGATCAGATTGGGTTTTTTGAAAGCTGGGCTCAGTCGTTCTTGAAACTCAGTAGTATTGGAGTTAAAAGTGGGGACGAAGGGGAAATTAGATTGTCTTGTTCTTCTAATAATGTTTGA 1053 51.76 MLSEDQILLFPVSFSDTTTDLFMAKTASCSDDICNSFLLLLVLSVPASTVALSFGFYAATCPAAEFMVRNIVRSASSVDPTIPGKLLRLLFHDCFVEGCDASVLLQGNGTERTDPGNKSLGGFEVIDSAKRNLEFFCPQTVSCADIVVLAARDAVEFTGGPFVQVPTGRRDGKISAASNVRPNIVDTSFSVDQMMTLFSSKGLSVDDLVVLSGAHTIGTAHCNAFSDRFRRDPNGRMSLVDASLDGSYANELMRRCSAGAASAVTVENDPATAAVFDNQYYRNILSHKGLFQSDSVLISDGRTRARVESFAEDQIGFFESWAQSFLKLSSIGVKSGDEGEIRLSCSSNNV 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1659169 1661801 - CmaCh09G003920.1 Cma09g00392 300397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00392 350 CDD secretory_peroxidase 52 346 IPR033905 GO:0004601|GO:0042744
Cma09g00392 350 Gene3D - 55 349 - -
Cma09g00392 350 PRINTS Plant peroxidase signature 61 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 85 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 SUPERFAMILY Heme-dependent peroxidases 52 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 ProSiteProfiles Plant heme peroxidase family profile. 51 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PANTHER PEROXIDASE 25-RELATED 43 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PANTHER PEROXIDASE 18-RELATED 43 348 - -
Cma09g00392 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Cma09g00392 350 Gene3D Peroxidase, domain 2 185 328 - -
Cma09g00392 350 Pfam Peroxidase 68 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Haem peroxidase superfamily signature 83 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma09g00392 350 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01679 Cma09g00392 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00392 Cma-Chr9:1659169 Cma18g01214 Cma-Chr18:9599503 5.07E-83 dispersed
Cma01g01679 Cma-Chr1:11455528 Cma09g00392 Cma-Chr9:1659169 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00392 K00430 K18328 csv:101211842 558.525