Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g00412 | ATGGCCCTATTTCGCAAGTTCTTTTATCGGAAGCCACCGGACGGGCTGTTAGAGATATCCGAAAGGGTTTATGTTTTCGATAGCTGCTTTACGACGGAGGTATTGGAAGAGGATGAATACAAGGTCTATATTGGAGGCATTGTAGGAAAGCTTCGTGAGAGTCTCACTGACGCTTCGTTCATGGTGTTTAATTTTCGAGAAGGGGAGGGTCATAGCCTCATTACTAATATATTATCTGTATATGATATGACCGTCATGGATTATCCGAGACAATATGAAGGCTGCCCTCTACTCACCATGGAGATGATCCACCACTTCTTAAGATCCAGCGAAAGCTGGCTCTCACTTGGGCAGCAAAATGTACTTTTGATGCATTGTGAAAGAGGGGGGTGGCCTGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAATATGCAGGGGAGCAAAAAACTTTGGACATGATTTACAAGCAAGCGCCTCGGGAGCTTTTGCAGTTGATGTCACCACTTAACCCAATGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGGCTCACAATGGCCTCCGCTCGACAGGGCGCTCACTCTAGACTGCATTATTATTAGATTGATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTCAGGATATATGGACAGGATCCCTTTTTGGTGGCGGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGTCAGTTTAAGCAGGTAGATTGTGAACTTCTTAAAATTGATATCCATTGCCATATACAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGTAAGGGAGGAGATGATGTTTCGGGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTGATGCTTAACCGTGACGACATTGATATCGTATGGCATGCAAACGATCAATTTCCAAAGGATTTCAGAGCAGAGATTCTTTTCTCAGAGATGGATGCTTCCGCACCACTTGTTTCAATTGAATTGCCAAATATTGAGGAGAAAGATGGCCTTCCGATTGAAGCATTTGCAAGAGTTCAAGAGATCTTTAGCACTGAGGACTGGCTAAGCCCAAAGGCTAATGCAGCTCTTAATATGCTCCAGAAAATAACAGCTACGAATTTTCTTACAGAGAAAATGGCTAGTTCCAGCCCTTTAGAGAGAACGGAGATGCTCGACTTATCTCTCGATAAACTAGCTATGGAATCAGAGACATCTGAAGACGATGTTATAAGTCCCCGATCGAAGATGGATACAGATCAATATCGGCCTTCTTTTGAACTATCCCACGCTGCAAGTTCAGCGAGATCAAAGATTGAACCCCCAGAATTGCAGGTTGCTCTCCAACTACCAGTTCAGTCTAAAATCATCACCCAACGAGTACCTCAACCTCCATTGTCGACGCCAGACTCCTTCCCTAGTTCTGTGCAAGGTTCACCTCGCGCAATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACATGATCATTCCACATTTAGTGGTAAAGAAGTCCTACAGCCAACAATGTCCTCACCATCATCTGGTCTGTTGAGTATGCGTGCTCTAGATTCCCTGAAAGATATTCAACCTAGTAAGCTTCCTATTTTGCCAACTTCAACCATTACTGATCCGTTGACACTTCACCAACGTTCCTTGAAACCTCTAAAATTTTCACATCCTCAACCTCCTCAAGCCGCTCCACGGGGGAGAAGTCAATTGTCACCTTCTTCATCTCAACCAACACCCACCTCTTTTCGTCGGGAGTCCCCACCCTCTTTCAATGAGAGTGAACCTTCAAGATCCTCTTCTAAGGAACCATTTTCTGTTCCCATTCATCCCTCACCTTCGGCTTTAGTAACATCTCTATGTACTAGTAGGACGAATGGTTCATTTTCCCCATCCGCACCACAACCCCCTTCTACGAAAGTACTGTTATCTTCTACGAAGAACTTGACGAGTGTCTCTACCCTTCCCTTCCCTCCTCCTCCTCCTCCATGCTGTACCCCTAACTTGGGTGCTAGTGTTGTCTTGCCAACATCAGTGCCCCAACCCCCACCTCCACCTCCTTCATTGAAGGACTCTATAATCACAGTCAGGCATGATCCCCGATCTCCACCTCCCGCACCACCCTTGCCTCCATCTTTTTTGAGTTCAACACCTACTTGTGATTCTACTATCACACCTCCTCCTAGTCTTGCACCACAAGATTCTGCCACAGTAGTTAGGAACTCAACGGTTGTACCTGGCGCTCCACCTCCCCCACCTCTCCCGTCTCATTCTTCTTCAAGTCCTAGTACTATATCTTCAGTGCCACCCCCGCCACCCCCTCCTCGTCTTGCACCAAATGTCTCTGCCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGATCCACCTTATGTTCAGGTGTTGCAACGTCAGCTCCACCTGCTCCTCCTCCTCCAGGTTTTTCAATGAAGGAGTCTGCAACACATGCTCCACCTGCACCCCCTCCCCCAGGTCTCAACGGTAATAAACTTTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCACTAATAACAGCAACATACCTTCTATTCCTGGACCACCTTCCAGTGGTCTATTCAGTGCAAAGGCACGATGCATTGGACGTTTGAACGCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCTTATCACTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCCTGTGGGCAGAGACACAAAAAAGTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAAAATCTGGAGGTGTGGGTGGAAATTCAAATCGCCTAGCCTCAGGGCCGAAATCAGAGAAAGTTCAATTGATTGAACTTCGACGGGCATATAATTGCGAAATTATGCTCTCTAAAGTTAAGATTCCTTTGCCCGATATGATGTGTTCAGTACTTGCATTGGATGAGTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAAATGGAATTACTTAAGGGGTACAGTGGTGATAAGGAGAACTTGGGAAAATGTGAACAGTTCTTTTTAGAATTGATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCATTTGCAGGCCTCTGAACTTAGAAATAATCTGAACACTATCAATTCGACATCTGATGAGATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACTATCCTTTCGTTGGGTAACGCTTTGAACCACGGAACGGCTAGAGGTTCGGCGATTGGATTTCGGCTTGATAGTCTCCTCAAACTCACTGATACACGAGCGAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTTTAGATTTTCCAAAGGACCTTGTGAGTTTGGAAGCTTCTACAAAGATACAACTGAAATATTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTGGAGAAAGTTGTTCAGGAATTAGCTAATTCCGAGAACGACGGGCACGTTTCAGAAAATTTTTGTCAGACTTTAAAAAACTTCCTTTCTCATGCTGAGGCCGAAGTGAGGTCCCTTGCCTTTCTTTATTCTAACGTGGGTAGAAATGCCGATGCACTCGCTCTTTATTTCGGCGAAGATCCAGCACGTTGCCCTTTCGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTCGTGCGAGCGCATGAAGAAAACTGTAAGCAGCTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGATAAGTTAAAGGTCAGTACCCCGAAAAAGGAGTCGCGATTCTTCATGCAGACACCAACCTAG | 3996 | 44.67 | MALFRKFFYRKPPDGLLEISERVYVFDSCFTTEVLEEDEYKVYIGGIVGKLRESLTDASFMVFNFREGEGHSLITNILSVYDMTVMDYPRQYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPMPSQLRYLQYVSRRNVGSQWPPLDRALTLDCIIIRLIPNMDGEGGCRPIFRIYGQDPFLVADRTSKVLFSTPKKSKLVRQFKQVDCELLKIDIHCHIQGDVVLECISLDNDLVREEMMFRVMFNTAFIRSNILMLNRDDIDIVWHANDQFPKDFRAEILFSEMDASAPLVSIELPNIEEKDGLPIEAFARVQEIFSTEDWLSPKANAALNMLQKITATNFLTEKMASSSPLERTEMLDLSLDKLAMESETSEDDVISPRSKMDTDQYRPSFELSHAASSARSKIEPPELQVALQLPVQSKIITQRVPQPPLSTPDSFPSSVQGSPRAILRYHSAPSALGITALLHDHSTFSGKEVLQPTMSSPSSGLLSMRALDSLKDIQPSKLPILPTSTITDPLTLHQRSLKPLKFSHPQPPQAAPRGRSQLSPSSSQPTPTSFRRESPPSFNESEPSRSSSKEPFSVPIHPSPSALVTSLCTSRTNGSFSPSAPQPPSTKVLLSSTKNLTSVSTLPFPPPPPPCCTPNLGASVVLPTSVPQPPPPPPSLKDSIITVRHDPRSPPPAPPLPPSFLSSTPTCDSTITPPPSLAPQDSATVVRNSTVVPGAPPPPPLPSHSSSSPSTISSVPPPPPPPRLAPNVSAPPPPPPPPFANSGSTLCSGVATSAPPAPPPPGFSMKESATHAPPAPPPPGLNGNKLSNVNGTSSQSHVGTNNSNIPSIPGPPSSGLFSAKARCIGRLNAKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKSDEASKAPEFDMSELESLFSAAAPNSKSGGVGGNSNRLASGPKSEKVQLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDESALDVDQVENLIKFCPTKEEMELLKGYSGDKENLGKCEQFFLELMKVPRVESKLRVFSFKIQFHLQASELRNNLNTINSTSDEIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGHVSENFCQTLKNFLSHAEAEVRSLAFLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFVRAHEENCKQLDYEKKKAQKEAAEKDKLKVSTPKKESRFFMQTPT | 1331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1750408 | 1759151 | + | CmaCh09G004120.1 | Cma09g00412 | 300417 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 793 | 822 | - | - | |
Cma09g00412 | 1331 | Gene3D | Formin, FH2 domain | 930 | 1324 | IPR042201 | - | |
Cma09g00412 | 1331 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 191 | IPR029021 | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 864 | 892 | - | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 728 | 742 | - | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 591 | 639 | - | - | |
Cma09g00412 | 1331 | ProSiteProfiles | C2 tensin-type domain profile. | 199 | 338 | IPR014020 | - | |
Cma09g00412 | 1331 | SMART | PTEN_C2_2 | 197 | 337 | IPR014020 | - | |
Cma09g00412 | 1331 | Gene3D | - | 196 | 341 | - | - | |
Cma09g00412 | 1331 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 837 | 1306 | - | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 1306 | 1331 | - | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 700 | 898 | - | - | |
Cma09g00412 | 1331 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 338 | IPR035892 | - | |
Cma09g00412 | 1331 | SMART | it6_source | 568 | 1326 | IPR015425 | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 581 | 639 | - | - | |
Cma09g00412 | 1331 | Pfam | Formin Homology 2 Domain | 913 | 1286 | IPR015425 | - | |
Cma09g00412 | 1331 | PANTHER | FORMIN-J | 1 | 1322 | - | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 1306 | 1320 | - | - | |
Cma09g00412 | 1331 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 15 | 187 | IPR029021 | - | |
Cma09g00412 | 1331 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 337 | IPR014020 | - | |
Cma09g00412 | 1331 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 911 | 1312 | IPR015425 | - | |
Cma09g00412 | 1331 | MobiDBLite | consensus disorder prediction | 743 | 770 | - | - | |
Cma09g00412 | 1331 | Coils | Coil | 1287 | 1307 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g01662 | Cma09g00412 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00804 | Cma-Chr1:4326581 | Cma09g00412 | Cma-Chr9:1750408 | 1.29E-150 | dispersed | |
Cma09g00412 | Cma-Chr9:1750408 | Cma10g00209 | Cma-Chr10:925548 | 9.60E-178 | dispersed | |
Cma19g00587 | Cma-Chr19:6516097 | Cma09g00412 | Cma-Chr9:1750408 | 4.78E-07 | dispersed | |
Cma01g01662 | Cma-Chr1:11366769 | Cma09g00412 | Cma-Chr9:1750408 | 0 | wgd | |
Cma10g00473 | Cma-Chr10:2140987 | Cma09g00412 | Cma-Chr9:1750408 | 0 | wgd | |
Cma11g00467 | Cma-Chr11:2260206 | Cma09g00412 | Cma-Chr9:1750408 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g00412 | - | - | csv:101214019 | 1870.9 |