Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00598 ATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGCGGCAGAGACATTCCGTCGGCAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGCGATATGGTTCCTAAAAGACATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGAGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTCACTTGCGAGTTCTGTGAGTTCCCGTTGCCAGCAGTAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCGCAGCTGCAGATACCGTTGCTGAATCTTCCAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCAATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCATGCACTGA 621 47.02 MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFFQRKAESNIMH 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2799326 2802428 - CmaCh09G005980.1 Cma09g00598 300603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00598 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 112 IPR013083 -
Cma09g00598 206 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 203 - -
Cma09g00598 206 MobiDBLite consensus disorder prediction 146 169 - -
Cma09g00598 206 MobiDBLite consensus disorder prediction 151 169 - -
Cma09g00598 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 58 IPR013083 -
Cma09g00598 206 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01467 Cma09g00598 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00598 Cma-Chr9:2799326 Cma19g00907 Cma-Chr19:8217342 1.70E-13 dispersed
Cma09g00598 Cma-Chr9:2799326 Cma01g01467 Cma-Chr1:10326381 4.64E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00598 - - csv:101203543 387.497