Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00686 ATGCCAGCCGGAGTGTTTTTGGGCTTACCAATTACTCTTCTCCATCGTGATCCTGAGTTATGGGGTGAAGATGCTGGCGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCTACAAAAAATCCAGCTGCTTTTATCCCATTTGGTTTGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCGCTATCAATTATCCTACAACGCTTCTCATTTGAGCTTTCTCCATCGTATACTCATGCTCCCATCGCAGCTATAACAGTCCAACCTCAACATGGAGCTCATATCATACTGCACAAACTGTGCAGAACTGTGTCTGTACCGATCGAGATGGCGTGTGTCACAGCCACGATATCCATTTGGATAGCTGTGGTGAGTTTAGTCGTATTGGGAGGGAAACTTCTCAACTGGATTTGGTTGAGGCCCAGGAGATTAGAGAAGTTTTTAAGGCAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTATGGAGACCTGAAGGACAGAACCGCCATGAGAGAGCAGGCCATCTCCAAGCCGATCAACTTCAACAATGATATATCTCCACGTGTTATTCCTTCTGTTCATCATACCATCCAGAAATATGGCAAGAATTCATTTATGTGGTTTGGCCCCATACCAAGATTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTACATTGATCAATGATATCCAAAAGCCAGTTATGAATCCCCTTCTCAAGTTGTTTGCAGGTGGAGTTGTAAACCATGAAGGAGCAAAATGGGTGAAACACAGAAAGATAATCAATCCTGCATTTCATTTACAAAAGCTTAAGGTTATGGTACCAGCATTCTATCATAGCTGCTACGACATGGTTAGCAAATGGGAAAGCATGGTCTTCGAGAGCGGGTCGTGTGAGTTAGACGTAATGCCTTATCTACAAGAAATGGCTGCTGATGTGATTTCTCGAACAGCATTTGGGAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAACTTCAAACTGAACTAGCTGTTCTGGTGAATCAACCTACCATGGGGATTTTTATTCCGGGATGGAGATTCCTACCCACAAAGTCGAACAAAAAAATGAAAGAGATAAGTAAGGAGATAACAACTCTGATCTTGGGTATTATAAATGAAAGGGAAAAGTCCATGAGCGCAGGTGAAGCTATGCATAGCGATCTGTTAGGCATTCTCATGGAATCCAATTTGAATGAAATTGGACGACATGGAAACAATAAAGACACTGGAATGAGCATAGAAGATGTCATTAATGAATGCAAGACTTTCTATATTGCTGGACAAGAAACTACAGCTACGTTACTAATTTGGACGATGATATTATTGAGTTCATACTCAGAATGGCAAGACCGAGCAAGAGAAGAGGTCTTTGAGATCTTCGGTAACAAGAAACCAGATTTTGATGGTCTAAGTCGACTAAAAGTTGTTCTCAGGTTATACTCACCAGCGAGTTTGCTTAGTCGACGTGTTAAAAAAGAAACAAAAGTTGGAAATTTGACTATACCAGCCGGAGTGTTTTTGGGCTTACCAATTACTCTTCTCCATCGTGATCCTGAGTTATGGGGTGAAGATGCGGGCGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCTACAAAAAATCCAAATGCTTTTATCCCATTTGGTTTGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCGCTATCAATTATCCTACAACGCTTCTCATTTGAGCTTTCTCCATCGTATACTCATGCTCCCATCGCAGCTATGAGCATGGCTTTGCTTTCTCAAATTCCAGCGTCGTTCTTCACTAAAAATCCCGAGCTCGCTCTCTCATCTGCCGTTAACACATCCAAGCTCACAAATTCCCCAAAAATCCAGCGAAGATGGTGCAATTTGGCAAGTCTTCCACGCCTCTCCTTCCAGTCGCCGGCCAGACTACGGCCGACGGCTGCTTTTAATTCCTCAAATTTTAAATTTATATAG 2055 41.75 MPAGVFLGLPITLLHRDPELWGEDAGEFKPERFSKGVSKATKNPAAFIPFGLGPRICIGLNFAMIEAKMALSIILQRFSFELSPSYTHAPIAAITVQPQHGAHIILHKLCRTVSVPIEMACVTATISIWIAVVSLVVLGGKLLNWIWLRPRRLEKFLRQQGFAGNSYRILYGDLKDRTAMREQAISKPINFNNDISPRVIPSVHHTIQKYGKNSFMWFGPIPRLHIMDPEQLKIVFTLINDIQKPVMNPLLKLFAGGVVNHEGAKWVKHRKIINPAFHLQKLKVMVPAFYHSCYDMVSKWESMVFESGSCELDVMPYLQEMAADVISRTAFGSSYEKGKKIFKLQTELAVLVNQPTMGIFIPGWRFLPTKSNKKMKEISKEITTLILGIINEREKSMSAGEAMHSDLLGILMESNLNEIGRHGNNKDTGMSIEDVINECKTFYIAGQETTATLLIWTMILLSSYSEWQDRAREEVFEIFGNKKPDFDGLSRLKVVLRLYSPASLLSRRVKKETKVGNLTIPAGVFLGLPITLLHRDPELWGEDAGEFKPERFSKGVSKATKNPNAFIPFGLGPRICIGLNFAMIEAKMALSIILQRFSFELSPSYTHAPIAAMSMALLSQIPASFFTKNPELALSSAVNTSKLTNSPKIQRRWCNLASLPRLSFQSPARLRPTAAFNSSNFKFI 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3235370 3241085 - CmaCh09G006860.1 Cma09g00686 300691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00686 684 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 569 578 IPR017972 GO:0005506|GO:0016705
Cma09g00686 684 PRINTS P450 superfamily signature 445 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS P450 superfamily signature 576 587 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS P450 superfamily signature 567 576 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PANTHER CYTOCHROME P450 FAMILY MEMBER 130 614 - -
Cma09g00686 684 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 105 - -
Cma09g00686 684 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 50 59 IPR017972 GO:0005506|GO:0016705
Cma09g00686 684 SUPERFAMILY Cytochrome P450 2 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 Gene3D Cytochrome P450 1 110 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 434 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 576 599 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 207 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 566 576 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 321 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PRINTS E-class P450 group I signature 454 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 SUPERFAMILY Cytochrome P450 197 608 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 Pfam Cytochrome P450 2 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 Pfam Cytochrome P450 205 618 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00686 684 PANTHER CYTOCHROME 130 614 - -
Cma09g00686 684 PANTHER CYTOCHROME 1 105 - -
Cma09g00686 684 Gene3D Cytochrome P450 191 626 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00686 Cma-Chr9:3235370 Cma09g00689 Cma-Chr9:3252677 5.53E-43 dispersed
Cma09g00686 Cma-Chr9:3235370 Cma09g00687 Cma-Chr9:3244762 7.25E-65 tandem
Cma01g01279 Cma-Chr1:9202397 Cma09g00686 Cma-Chr9:3235370 1.95E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00686 - - csv:101222418 778.089