Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00687 ATGATCTTGAACGAGGTTCTCAGGTTATACTCACCAGTGGGTATGCTTGGCCGACATGTTAAAAAAGAAACAAAACTTGGAAATTTGACTATACCAGCCGGAGTGTTCCTGGGCCTACCAATTCTTCAAATTCATCGTGATCCTGAGTTATGGGGTGAGGATGCAGACGAATTTAAACCAGAAAGATTTTCTGAGGGAGTTTCTAAAGCTACAAAAAATCCAGCTGCTTTTATCCCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAAATGGCGTTATCAATCATCCTACAACGCTACTCATTTGAGCTTTCTCCATCGTATACTCATGCTCCCACCGCGGCTATAACAACCCAACCTCAACATGGAGCTCATATCATACTGCACAAACTGTAG 420 42.38 MILNEVLRLYSPVGMLGRHVKKETKLGNLTIPAGVFLGLPILQIHRDPELWGEDADEFKPERFSEGVSKATKNPAAFIPFGWGPRICIGLNFAMIEAKMALSIILQRYSFELSPSYTHAPTAAITTQPQHGAHIILHKL 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3244762 3245181 - CmaCh09G006870.1 Cma09g00687 300692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00687 139 PRINTS E-class P450 group I signature 77 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PRINTS E-class P450 group I signature 41 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PRINTS E-class P450 group I signature 87 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PRINTS P450 superfamily signature 1 10 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 SUPERFAMILY Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Cma09g00687 139 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 Pfam Cytochrome P450 1 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00687 139 PANTHER CYTOCHROME P450 72A15-LIKE 1 137 - -
Cma09g00687 139 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00687 Cma-Chr9:3244762 Cma11g01020 Cma-Chr11:5532841 1.10E-75 dispersed
Cma09g00686 Cma-Chr9:3235370 Cma09g00687 Cma-Chr9:3244762 7.25E-65 tandem
Cma09g00687 Cma-Chr9:3244762 Cma09g00688 Cma-Chr9:3245631 1.18E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00687 - - csv:101204497 242.662