Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00688 ATGGAGTACTCATGGGTTGGGGCTGCCATTTCAGTTGTAGTGAGCTTATTAGCAGTCTGGGTATCATGGGGTGTGTTGAACTGGGTTTGGATCAGGCCGAGGAAGCTCCAGAAGTGGCTGAGAGAACAAGGCCTGGCCGGAAACCCTTACCGGATTCTCTATGGGGACCTAAAGGAGAGCTTGGCACTGTTGAAGGAGGCCAACTCCAAGCCTATGGCCTTCTCCCATGACATTGGCGCAAGGGTGTTGCCCTCCATCTCTAATGCCATCCAAAACCATGGAAAGAATTCATACATATGGCTTGGGCCATATCCGAGAGTAAACATCATGGATCCAGAGCAACTTAACGCTACCTTTTCTCTGATCAATGATATCCAAAAGCCAGATATGAACCCGTTCTTTAAGTTCCTTTTAGAGGGAATTATAACACATGAAGGTGAAAAATGGGCTAAACATAGAAAGATTATCAACCCTGCATTTCATTTGGATAAGTTGAAGAATATGGTACCAGTGTTCGTGGATAGTAGCAATGAGATATTGAGTGAATGGGAAAGAATAGTCCCTGAAGAAGGGTGTTGTGAGTTGGATGTAATGCCATATCTACAAAGCTTGACACGTGATGCCATTTCCAGAGCAGCATTTGGAAGTAGCTATAAGGAAGGACAAATGATCTTCCAGCTTCTTAAACAACTTACTGATTGGGTGGTTAAGGTTGCTGGTGGAATTTATATTCCTGGATGGAGGTTTCTACCAACAAAGTCGAACAAGAAAATGAAGGAAATAAATAGAGAAATAAAAAGAATGGTTTTGAGTATTATAAACAAAAGGAAAATGGCAATGAAGGAAGGTGAGGCTGTACAGAACGACCTATTGGGCATTCTCCTACAATCCAATTCAAAAGAAATTGAAGCACAAGGAAACAACAAAGACGTTGGAATGAGCATAGAAGATATCATTAATGAGTGCAAGATCTTCTACATTGCTGGCCAAGAAACCACAGAACAGCTATTAACTTGGACAATGATTTTGTTGAGCTTCCACACCGAGTGGCAAGAACGAGCTAGAGCTGAGGTTCGAGAAGTATTCGGTAACAACATCCCAGATTCCGATGGTCTACCTCGTCTAAAAGTGGTAAATATGATTTTACACGAAGTTTTAAGGCTATATCCACCTGCAAGTACGCTTAATCGGATGGTTAAAAAGGAAACGAGAGTTGGAAACTTGAGTCTACCAGCTGGAGTGATGTTGATTGCGCCGGTGGTTCTTATCCACCGTGATCGTGAGATATGGGGTGAGGATGCGAATGAGTTTAAACCAGAGAGATTTAGCAATGGAGTTTCTAAAGCATCGAAGTTGCAGCCTGCTTTCTTTCCATTTGGATGGGGTCCTCGGACATGCATGGGGCAGGACCTTGCGATACTTGAGGCCAAAGTTGCGATGTCCTTGATTCTACAACGTTTTTCATTTGAACTCTCTCCATCCTATGCTCATGCTCCCACTCTGCTTATGACTACTCAACCTCAACATGGAGCTCATATCATTCTACGCAAATTGCCCAAGAAACTAGAGAAGCTTTTAAGACAGCAAGGGCTCGCCGGAAATTCTTACCGGATTCTCTACGGAGACTTGAAGGAGAGAGCCGCCATGAGGGAGCAGGCCATCTCCAAACCGATGAACTTCTCTAATGATATTTCTCCACGTGTTACTCCTTCTATTCATCATATCATCCAGAAATATGGCAAGAATTCATTTATGTGGCTTGGCCCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTGCATTGTTCAATGATATCCAAAAGCCATCTATGAATCCCCTTGTCAAGTTAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTTAAGGGTATGGTACCAGCATTCTATCATAGCTGCTACGAGATGGTTGGCAAATGGGAAAGCATGGTCTCCGAGGAGGGATCGTGTGAGCTAGATGTAATGCCTTATCTACAACAAATGGCTGCTGATGTGATTTCTCGAACAGCATTTGGGAGTAGCTATGAGAAAGGAAAAAAGATCTTCAAACTTCAAACTGAACTAGCTGATTTGGTGATTCAAACTATCATGAGGATTTATATTCCGGGATGGAGATTCCTACCCACAAAGTCGAACAAAAAAATGAAAGAGATTAGCAAGGAGATATCATCTTTGATCTTGGGTATTATAAATGAACGGGAAAAGTCTATGAAGGCAGGTGAAGCTATGAATAGCGATCTATTAGGCATTCTCATGGAATCAAATTTGAACGAAATTGGACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTCATAGATTAA 2370 42.03 MEYSWVGAAISVVVSLLAVWVSWGVLNWVWIRPRKLQKWLREQGLAGNPYRILYGDLKESLALLKEANSKPMAFSHDIGARVLPSISNAIQNHGKNSYIWLGPYPRVNIMDPEQLNATFSLINDIQKPDMNPFFKFLLEGIITHEGEKWAKHRKIINPAFHLDKLKNMVPVFVDSSNEILSEWERIVPEEGCCELDVMPYLQSLTRDAISRAAFGSSYKEGQMIFQLLKQLTDWVVKVAGGIYIPGWRFLPTKSNKKMKEINREIKRMVLSIINKRKMAMKEGEAVQNDLLGILLQSNSKEIEAQGNNKDVGMSIEDIINECKIFYIAGQETTEQLLTWTMILLSFHTEWQERARAEVREVFGNNIPDSDGLPRLKVVNMILHEVLRLYPPASTLNRMVKKETRVGNLSLPAGVMLIAPVVLIHRDREIWGEDANEFKPERFSNGVSKASKLQPAFFPFGWGPRTCMGQDLAILEAKVAMSLILQRFSFELSPSYAHAPTLLMTTQPQHGAHIILRKLPKKLEKLLRQQGLAGNSYRILYGDLKERAAMREQAISKPMNFSNDISPRVTPSIHHIIQKYGKNSFMWLGPIPRVHIMDPEQLKTVFALFNDIQKPSMNPLVKLKIINPAFHLEKLKGMVPAFYHSCYEMVGKWESMVSEEGSCELDVMPYLQQMAADVISRTAFGSSYEKGKKIFKLQTELADLVIQTIMRIYIPGWRFLPTKSNKKMKEISKEISSLILGIINEREKSMKAGEAMNSDLLGILMESNLNEIGQHGNNKDIGMSIEDVID 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3245631 3250960 - CmaCh09G006880.1 Cma09g00688 300693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00688 789 Gene3D Cytochrome P450 76 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 Pfam Cytochrome P450 90 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 Pfam Cytochrome P450 623 784 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PANTHER CYTOCHROME P450 FAMILY MEMBER 26 515 - -
Cma09g00688 789 PANTHER CYTOCHROME P450 FAMILY MEMBER 518 789 - -
Cma09g00688 789 PANTHER CYTOCHROME 518 789 - -
Cma09g00688 789 PANTHER CYTOCHROME 26 515 - -
Cma09g00688 789 SUPERFAMILY Cytochrome P450 79 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Cma09g00688 789 Gene3D - 668 789 - -
Cma09g00688 789 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma09g00688 789 SUPERFAMILY Cytochrome P450 566 770 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01280 Cma-Chr1:9205858 Cma09g00688 Cma-Chr9:3245631 6.40E-19 dispersed
Cma09g00688 Cma-Chr9:3245631 Cma10g01055 Cma-Chr10:6520871 4.30E-118 dispersed
Cma18g01091 Cma-Chr18:8967990 Cma09g00688 Cma-Chr9:3245631 2.28E-77 dispersed
Cma09g00687 Cma-Chr9:3244762 Cma09g00688 Cma-Chr9:3245631 1.18E-62 tandem
Cma09g00688 Cma-Chr9:3245631 Cma09g00689 Cma-Chr9:3252677 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00688 - - cmax:111477005 1193.72