Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00704 ATGAAGAAGTTTGAGATGGTTTTCATACCTGCCCCAGGAATGGGTCACCTTTCTTCCACAGTAGAAATGGCCAATGTTCTTGTCACTCGAGATCCTAGTCTCTCTGTCACAGTGCTCGCCATGAAGCTGCCCTACGATCTCAAAGTTGCTGAATGTATCGACTCACTTTCTATGTCTTTCACAGGCAAATCTATACAATTCATCGTCCTTCCTGAACCGTCCCTTCCAGAAGAAAGTAAAAAGGACTTCATTGTGCTGGTTGAAAGCTACAAAGCTTATGTCAGAGAGGCTGTCGCCAACTTGGTTGGCTCTGAGACAAGTCTTGACTCGCCTCAGCTAGCTGGGTTTGTCATTGACATGTTCTGTACAACCATGATCGATGTGGCTAATGAATTTGGGGTTCCTTGTTATGTGTTTTATACCTGCAGCGCTAGCTTTCTGGCTTTTAGTGTTCATCTTCGAGAGCTTTACGACCAGAATGATAGCAATGAGGTGGTGGAACAGTTGCTGAACTCGGATACTGAGTTCATTACTTTGCCAAATTTTGTCAATCCCATTCCCAGTAAACTCATTCCTAGTCTCTTCTCCAACAAGGACAAGGCCGTTTGGTTTCATAACCACATTAAGAGATTTAGATCAGAAATCAATGGGATTCTTATCAATACATTTATGGAGATGGAATTTCATGCCATGGAGTCCATATCGAGTAATGGCAGAGTCTTCCCACCGCTATACTTCGTTGGACCCATTTTGCATTTGAAAAACACAGGGGTTGCTGGATCAAGTGAGGCTGAAAATTATGCAGAAATATTACAATGGCTTGATGGTAAACCTCCATCATCAGTGGTTCTCGTGTGTTTTGGGACCATGGTGAGCTTTGATGAAAATCAGGTGGTGGAGATAGCAAATGCATTGGAGGAAAGTGCGGTTGGCTTCATATGGTCCCTTAGGCAGCCTCCACCAAAGGGTAAGTTCAAAGCGCCGCCGAAAAACTACACCGACATCAAAGACGTCCTACCGGAGGGATTTCTCGATAGAACAGCAGATACTGGGAGAGTGATCGGATGGACGTCACAGATAGAGCTATTGGCACACCCCTCTATAGGAGGATTCATGTCACATTGTGGTTGGAACTCGATTATAGAAAGCGTATGGCATGGAGTGCCGATGGCGACATGGCCTATGCACGCCGAGCAACAATTCAATGCCTTTGAGATGTTGCTGAACTCGGATACTGAGTTCATTACTTTGCCAAATTTTGTCAATCCCATTCCCAGTAAACTCATTCCTAGTCTCTTCTCCAACAAGGACAAGGCCGTTTGGTTTCATAACCACATTAAGAGATTTAGATCAGAAATCAATGGGATTCTTATCAATACATTTATGGAGATGGAATTTCATGCCATGGAGTCCATATCGAGTAATGGCAGAGTCTTCCCACCGCTATACTTCGTTGGACCCATTTTGCATTTGAAAAACACAGGGGTTGCTGGATCAAGTGAGGCTGAAAATTATGCAGAAATATTACAATGGCTTGATGGTAAACCTCCATCATCAGTGGTTCTCGTGTGTTTTGGGACCATGGTGAGCTTTGATGAAAATCAGGTGGTGGAGATAGCAAATGCATTGGAGGAAAGTGCGGTTGGCTTCATATGGTCCCTTAGGCAGCCTCCACCAAAGGGTAAGTTCAAAGCGCCGCCGAAAAACTACACCGACATCAAAGACGTCCTACCGGAGGGATTTCTCGATAGAACAGCAGATACTGGGAGAGTGATCGGATGGACGTCACAGATAGAGCTATTGGCACACCCCTCTATAGGAGGATTCATGTCACATTGTGGTTGGAACTCGATTATAGAAAGCGTATGGCATGGAGTGCCGATGGCGACATGGCCTATGCACGCCGAGCAACAATTCAATGCCTTTGAGATGGTCTCTCAGGTACTAGAGCTTGGAATTGTGGTACATTCGGTAATTATAGGGATTGGTATGGGTGTCTCAGAAACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTAGGAGGATGCATCGCCCAGGCAAAGCTCACAACCAGGGCAGCGGTGCTAATGGCAGTTTTCTTCTGCCTGACAACGCCAATTGGGATAGCAATAGGCATTGGAGTAACCAACAGCTACGACGAAGATAGCCCAAAAGCACTCATAGTTGAGGGGATTCTGAATGCAGCCTCAGCTGGTATCTTAATGCATATGGCTCTTGTGGACTTTCTGGCTGCTGATTTTGTGAGCCTTAGAATGCAGAGCAATGCAAAGCTTCAATTCTTTGCCAATGTTGCTCTTATTGTTGGAGCTGCTTTGATGTCTTTACTTGCCATATGGGCTTGA 2397 45.14 MKKFEMVFIPAPGMGHLSSTVEMANVLVTRDPSLSVTVLAMKLPYDLKVAECIDSLSMSFTGKSIQFIVLPEPSLPEESKKDFIVLVESYKAYVREAVANLVGSETSLDSPQLAGFVIDMFCTTMIDVANEFGVPCYVFYTCSASFLAFSVHLRELYDQNDSNEVVEQLLNSDTEFITLPNFVNPIPSKLIPSLFSNKDKAVWFHNHIKRFRSEINGILINTFMEMEFHAMESISSNGRVFPPLYFVGPILHLKNTGVAGSSEAENYAEILQWLDGKPPSSVVLVCFGTMVSFDENQVVEIANALEESAVGFIWSLRQPPPKGKFKAPPKNYTDIKDVLPEGFLDRTADTGRVIGWTSQIELLAHPSIGGFMSHCGWNSIIESVWHGVPMATWPMHAEQQFNAFEMLLNSDTEFITLPNFVNPIPSKLIPSLFSNKDKAVWFHNHIKRFRSEINGILINTFMEMEFHAMESISSNGRVFPPLYFVGPILHLKNTGVAGSSEAENYAEILQWLDGKPPSSVVLVCFGTMVSFDENQVVEIANALEESAVGFIWSLRQPPPKGKFKAPPKNYTDIKDVLPEGFLDRTADTGRVIGWTSQIELLAHPSIGGFMSHCGWNSIIESVWHGVPMATWPMHAEQQFNAFEMVSQVLELGIVVHSVIIGIGMGVSETPSTIKPLVAAITFHQLFEGMGLGGCIAQAKLTTRAAVLMAVFFCLTTPIGIAIGIGVTNSYDEDSPKALIVEGILNAASAGILMHMALVDFLAADFVSLRMQSNAKLQFFANVALIVGAALMSLLAIWA 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3316517 3322690 + CmaCh09G007040.1 Cma09g00704 300709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00704 798 PANTHER UDP-GLYCOSYLTRANSFERASE 71B2 409 656 - -
Cma09g00704 798 PANTHER GLYCOSYLTRANSFERASE 409 656 - -
Cma09g00704 798 Gene3D Glycogen Phosphorylase B; 506 672 - -
Cma09g00704 798 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 409 647 - -
Cma09g00704 798 Pfam ZIP Zinc transporter 632 795 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma09g00704 798 TIGRFAM zip: ZIP zinc/iron transport family 634 798 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cma09g00704 798 ProSitePatterns UDP-glycosyltransferases signature. 594 637 IPR035595 -
Cma09g00704 798 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 279 406 IPR002213 GO:0008194
Cma09g00704 798 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 517 647 IPR002213 GO:0008194
Cma09g00704 798 Gene3D Glycogen Phosphorylase B; 7 257 - -
Cma09g00704 798 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Cma09g00704 798 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 406 - -
Cma09g00704 798 CDD GT1_Gtf-like 7 404 IPR002213 GO:0008194
Cma09g00704 798 CDD GT1_Gtf-like 456 656 IPR002213 GO:0008194
Cma09g00704 798 Gene3D Glycogen Phosphorylase B; 260 406 - -
Cma09g00704 798 PANTHER GLYCOSYLTRANSFERASE 4 407 - -
Cma09g00704 798 PANTHER UDP-GLYCOSYLTRANSFERASE 71B2 4 407 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00701 Cma-Chr9:3296152 Cma09g00704 Cma-Chr9:3316517 1.21E-65 dispersed
Cma09g00704 Cma-Chr9:3316517 Cma13g00842 Cma-Chr13:6989513 2.13E-69 dispersed
Cma09g00703 Cma-Chr9:3311184 Cma09g00704 Cma-Chr9:3316517 4.26E-87 tandem
Cma01g01296 Cma-Chr1:9284934 Cma09g00704 Cma-Chr9:3316517 2.00E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00704 - - cmax:111477034 817.379