Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00766 ATGGCGGCAGCGCTCGGTGGAGGTAGTGGTACCGGAGGCGGATTGATATTCGGCAGTGGGGATGTGTCGAAGGCGCACGCGGCTATGGCTTTGGTGCAATTAATCAATGGAGGTTATCATGTTATCACCAAAGTCGCCCTTAATGTTGGGATGAATCAACTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCACGATTCTTGCCCCTGTTGCTTATGTTCGGGAGAAGCGAGTTCGTTTGCCCATGACTCGAGAACTCTTCATATCGTTTTTCATTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTTGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTTCCATTCCAGTTTTTACATTCCTTTTGGCTGTTATGATGGGCACAGAGTCTGTGAACTTACTCAAAGTGGAAGGACAGGCAAAGGTTGGTGGTACACTCGTTTGTGTCTGTGGTGCCATATTGATGGTTTTATTCCGTGGTCCAGCTTTGTTTGGAAACCCTGAATCTGATTTCATGTCGCATAACGAAATAAGTGCAAGGGGTCAACCAGAGCCTGCCGGATGGCTATTGTCTAACCTTCTGGAGTATGGATTGGATCATTTTCATATTGGGGTATTATGCTTGATAGGGAACTGTATGTGCATGGCTTGTTTCTTGGCTATCCAGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACGGCATATTCTTATTTATTTGGTGCTACATTGATGGTGATCACATCTTTCTTCATGACCAATGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTCGCTGTCCTTTATGCTGGAATTTTTGCATCTGCCATCAATTATGGACTCTTGACATGGTGCAATAAGATATTGGGGCCTGCATTGGTCGCTCTTTACAACCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGCTCTCTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCACATAGGGAACGACAAACAACTCCAATTTTGCTTCCACATTCAACCAGGTCCTCTGAACCACTTATTCATAAAGATGCATTGACTAACAAGATTGCATATCAGATAGGACAGATTTTCTCAGGCTCTACATCTTCACCCAAATCTGATTGTGAAGAACTGGATGGTTTCTGGGTCTCTGGCTTGAGGATCCGACGTGATTTCATAAGTGATAAACCAAGAGGCAATACCGAAGTACACTCGATATTCACAACTAAAGCTGATGTTAGTAACTAA 1332 44.07 MAAALGGGSGTGGGLIFGSGDVSKAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALTILAPVAYVREKRVRLPMTRELFISFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPSIPVFTFLLAVMMGTESVNLLKVEGQAKVGGTLVCVCGAILMVLFRGPALFGNPESDFMSHNEISARGQPEPAGWLLSNLLEYGLDHFHIGVLCLIGNCMCMACFLAIQARVLKKYPANLSVTAYSYLFGATLMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTPILLPHSTRSSEPLIHKDALTNKIAYQIGQIFSGSTSSPKSDCEELDGFWVSGLRIRRDFISDKPRGNTEVHSIFTTKADVSN 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3694122 3702006 + CmaCh09G007660.1 Cma09g00766 300771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00766 443 PANTHER WAT1-RELATED PROTEIN 23 397 - -
Cma09g00766 443 Pfam EamA-like transporter family 213 350 IPR000620 GO:0016020|GO:0016021
Cma09g00766 443 Pfam EamA-like transporter family 29 165 IPR000620 GO:0016020|GO:0016021
Cma09g00766 443 PANTHER WAT1-RELATED PROTEIN 23 397 IPR030184 GO:0016021|GO:0022857
Cma09g00766 443 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 169 - -
Cma09g00766 443 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00766 Cma-Chr9:3694122 Cma05g00275 Cma-Chr5:1163426 2.19E-75 dispersed
Cma09g00766 Cma-Chr9:3694122 Cma12g00435 Cma-Chr12:2275723 1.83E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00766 - - csv:101222886 721.465