Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00767 ATGCAGCTATATCATCATCCGTTCTCTTTGAACAGCCAGAAGGTGAGACTCGCCTTGGAAGAGCAAGGCATCGATTACACGTCGTTTCATGTCAATCCTATCACGGCGAAGAACATGGACGCCTCGTTCTTCAAGATGAACTCAAATGCAAAACTTCCCGTCTTTCAAAATGGTTCCCATGTCATTTTCGACACCATCGAGATAATTCAGTATATAGAAAGAATTGCCATTGTCTCCTCGGGGACCGATGACGTAATGCCGAGTAGTCGAGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCTGAGAAGTACCGTCTCGCTGTTACCAAATTTAGAAGGCAGGTAGTGATCGCTCGGATGGCCGAAACTCCCGAAATGGCTGCTACTTACCATCATAAGCTCCGAGAAGCATACGAGACCGAAGACGAATTGAAAAAAAAAACCGCTGTCAAACAAAGCACCGAATATCTAGTTACACTTCTTGATGAAATCGAGTTGAAACTAGGCCAAACTTCTTACTTGGCAGGGGAAGAGTTTACCATGGCCGATGCCGTGTTCATACCTGTGCTGGCTCGGCTCGTTCTGTTGAAGCTGGCCGACGAGTACATCGGTAGCAGACCGAACATTGCAGAGTATTGGATGTTGGTGCAGCAGAGACCAAGCTACAAGAAGGTGATTGGGAAGTACTTTAATGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGTTTTGTTCATATTAGAACCTTGCTGAGGAGATATTGA 804 44.65 MQLYHHPFSLNSQKVRLALEEQGIDYTSFHVNPITAKNMDASFFKMNSNAKLPVFQNGSHVIFDTIEIIQYIERIAIVSSGTDDVMPSSREVVEWMHKIQEWNPKFFTLAHIPEKYRLAVTKFRRQVVIARMAETPEMAATYHHKLREAYETEDELKKKTAVKQSTEYLVTLLDEIELKLGQTSYLAGEEFTMADAVFIPVLARLVLLKLADEYIGSRPNIAEYWMLVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3702010 3703165 + CmaCh09G007670.1 Cma09g00767 300772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00767 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Cma09g00767 267 CDD GST_N_family 1 73 - -
Cma09g00767 267 Gene3D - 126 238 - -
Cma09g00767 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Cma09g00767 267 Pfam Glutathione S-transferase, C-terminal domain 161 210 - -
Cma09g00767 267 SUPERFAMILY GST C-terminal domain-like 134 241 IPR036282 -
Cma09g00767 267 Gene3D Glutaredoxin 1 75 - -
Cma09g00767 267 SFLD Main (cytGST) 1 231 - -
Cma09g00767 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Cma09g00767 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cma09g00767 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Cma09g00767 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 251 IPR010987 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01364 Cma09g00767 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00767 Cma-Chr9:3702010 Cma12g00385 Cma-Chr12:1988809 1.82E-12 dispersed
Cma01g01364 Cma-Chr1:9715391 Cma09g00767 Cma-Chr9:3702010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00767 K22077 - csv:101222476 477.248