Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00784 ATGTCGGAAGCGAAGGTTTTCGATGCGACGGCGGCGACGGAATTGGTGAAGGAGCTGAGAGGCACTTTTGCCTCCGGCAGGACGCGGAGCTATGAGTGGAGAGTATCGCAGCTTGAGAGCATCTTGAAGCTTAGCGCTGACCATGAGGAAGAGATCAGCGATGCGATTCACTCCGACCTCTCCAAGCCTGCGTTGGAATCCATCATTCATGAGATAGGCATGGTAAAAAATTCGTGTAAATTGGCACTCAAAGAACTTAGGCGTTGGATGACACCAGAGAAGGTTCAAACTACAATTACCACTTTTCCTTCGTCTGCTGAAATTGTACCAGAACCTTTGGGTGTTGTGCTGATCATTTCTCCTTGGAATTATCCATTCTTTTTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAACAACATCATCTTTAGTGGCTAAACTTTTGGTGAAGTATTTGGATACTTCTGCCGTAAAAGTTGTCGAGGGTGCTGTTCCCGAAACTAATGCTTTGCTTGAGCAAAAGTGGGATAAGATATTTTACACAGGCAATGGGAGAGTGGGGCGTATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTGGACTCAAAAATTAATTTACAAGTTGCGTGCCGGCGGATTATTGCTGGTAAGTGGGGTGGTAACAATGGACAAGCATGCGTTTCTCCTGATTATATCATAACTACGAAAGAAGTTGCTCCAAAATTGGTGGAGTCCCTAAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCATTGGAATCTAAAGATTTATCTCGCATTGTGAATGCTAACCACTTTGATCGCTTGACAAAGCTCTTGGATGATGATAAAGTTTCTGGCAAGATTGTGCTTGGAGGTGAAAAGGACAAATCCAAATTGCAGATTGCTCCCACCCTCTTACTGGATGTCCCTCGAGACTCTCTGATTATGACAGAGGAGATATTTGGTCCCTTACTTCCCATTATCACTGTAGACAAACTGGAGGACTGCTTCGAAATAGTGAATTCTGTCCCAAAGCCACTGGCAGCATATTTATTTACCAGCAATAAAAATCTCAAGGAACAGTTCGTGGCTTGCATCTCTGCAGGGGCTGTGGTTATCAATGACACCACATTACATCTGGCAGTTAGCACACTACCATTTGGAGGAGTTGGGGAGAGCGGAATGGGAGCTTATCATGGAAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTTCTTTATCGAAGTTTTGCAGGCGATGTGGCGATGAGATACCCGCCTTACACACCGGGAAAGCTAAGATTTCTGAAAGCTCTACTTGGAGATGGCATATTGGGACTCATTCGTGCTCTTCTTGGTTGGTCGTAA 1455 44.6 MSEAKVFDATAATELVKELRGTFASGRTRSYEWRVSQLESILKLSADHEEEISDAIHSDLSKPALESIIHEIGMVKNSCKLALKELRRWMTPEKVQTTITTFPSSAEIVPEPLGVVLIISPWNYPFFLSLDPVVGAIAAGNAVVLKPSEISPTTSSLVAKLLVKYLDTSAVKVVEGAVPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVACRRIIAGKWGGNNGQACVSPDYIITTKEVAPKLVESLKQELERFYGKNPLESKDLSRIVNANHFDRLTKLLDDDKVSGKIVLGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKLEDCFEIVNSVPKPLAAYLFTSNKNLKEQFVACISAGAVVINDTTLHLAVSTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDVAMRYPPYTPGKLRFLKALLGDGILGLIRALLGWS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3790911 3796862 - CmaCh09G007840.1 Cma09g00784 300789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00784 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Cma09g00784 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 439 IPR016162 GO:0016491
Cma09g00784 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Cma09g00784 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 - -
Cma09g00784 484 PIRSF ALDH 1 477 IPR012394 GO:0006081
Cma09g00784 484 PANTHER ALDEHYDE DEHYDROGENASE 4 484 IPR012394 GO:0006081
Cma09g00784 484 SUPERFAMILY ALDH-like 14 457 IPR016161 GO:0016491
Cma09g00784 484 Pfam Aldehyde dehydrogenase family 8 441 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00784 Cma-Chr9:3790911 Cma17g00366 Cma-Chr17:2030351 6.11E-48 dispersed
Cma09g00784 Cma-Chr9:3790911 Cma09g00785 Cma-Chr9:3798961 0 tandem
Cma16g00646 Cma-Chr16:3361502 Cma09g00784 Cma-Chr9:3790911 2.02E-135 transposed
Cma01g01383 Cma-Chr1:9802339 Cma09g00784 Cma-Chr9:3790911 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00784 K00128 - csv:101219569 839.336