Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00785 ATGGCGGAGAGAGAGGTGTTTGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGGAAGACACGAAGCTACGAATGGAGAGTGAATCAACTGAAGAATCTGTTGAAGTTGATCGAAGAAAACGAGGAAGAGATGGTCGATAAGATCCATTCAGATCTTCATAAACCCGAATCCGAAGCCTTTGCCCATGAGGTAGGTCTGTTAAAAAAATCGTGTCAATTGGCACTTAAAGAACTTAGGCATTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCATATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTGGGTGTTGTCCTGATTATTTCAACCTGGAATTATCCATACTTGGTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTCAAGCCATCGGAAATTTCCCCATCGACATCATCTTTAATGGCTAAACTTTTAGGGAAGTATTTGGATACTTCTGCTGTAAGAGTTGTTGAGGGTGCTGTTCCCGAAACTTCTGCTTTGCTTGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTAGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTATTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATTTCTGGTAAGTGGGGTTGCAACAATGGACAAGCATGCGTTGCTCCTGATTATGTTATAACTACCAAAGAATTTGCTCCAAAATTGGTGGAGTCCCTGAAACAAGAACTGGAGAGATTTTACGGAAAGAATCCATTGGAAACTAAAGATATATCTCGCATTGTGAATGCTTACCACTTTGATCGCTTGATAAAACTCCTAGAGGATGATAAAATTTCTGGCAAGATTGTGCATGGTGGTGAAAAGGACAAATCCAAATTGCAGATTGCTCCCACCCTCTTATTGGATGTTCCTCGAGACTCTCTGATTATGACGGAGGAGATATTTGGTCCCTTACTTCCCATTCTCACGGTCGACAAAGTGGAGGACAGCTTTGAAGTAGTCAACTCGGGCTCGAAGCCACTTGCAGCATATTTATTTACCAACAATAAGAAGCTCAAGGAACAGTTCGTGGCTTGTATCTCTGCAGGGGCCATGGCCATCAATGAAACTGCCTTACAGCTGTCGGTTAACACGCTACCATTCGGAGGAGTTGGTGAGAGCGGAATGGGAGCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAGAAGGCTGTACTTTATCGAATTTTCGCAGGCGACATGCCGATGAGATACCCGCCTTACTCAAAGGAAAAGCTAAGATTTCTGAAAGCTCTTCTTGGAGGTAGCATATTGGAACTCATTCGTGCTCTTCTTGGTTGGTAG 1452 43.87 MAEREVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLIEENEEEMVDKIHSDLHKPESEAFAHEVGLLKKSCQLALKELRHWMAPEKVKTSITIFPSSAAIVPEPLGVVLIISTWNYPYLVSLDPVVGAIAAGNAVVLKPSEISPSTSSLMAKLLGKYLDTSAVRVVEGAVPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIISGKWGCNNGQACVAPDYVITTKEFAPKLVESLKQELERFYGKNPLETKDISRIVNAYHFDRLIKLLEDDKISGKIVHGGEKDKSKLQIAPTLLLDVPRDSLIMTEEIFGPLLPILTVDKVEDSFEVVNSGSKPLAAYLFTNNKKLKEQFVACISAGAMAINETALQLSVNTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRIFAGDMPMRYPPYSKEKLRFLKALLGGSILELIRALLGW 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3798961 3806003 - CmaCh09G007850.1 Cma09g00785 300790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00785 483 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Cma09g00785 483 Coils Coil 35 55 - -
Cma09g00785 483 PANTHER ALDEHYDE DEHYDROGENASE 3 483 - -
Cma09g00785 483 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Cma09g00785 483 Pfam Aldehyde dehydrogenase family 8 441 IPR015590 GO:0016491
Cma09g00785 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Cma09g00785 483 PIRSF ALDH 2 479 IPR012394 GO:0006081
Cma09g00785 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 439 IPR016162 GO:0016491
Cma09g00785 483 PANTHER ALDEHYDE DEHYDROGENASE 3 483 IPR012394 GO:0006081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01383 Cma09g00785 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01383 Cma-Chr1:9802339 Cma09g00785 Cma-Chr9:3798961 0 dispersed
Cma01g01384 Cma-Chr1:9807516 Cma09g00785 Cma-Chr9:3798961 9.09E-33 dispersed
Cma02g01246 Cma-Chr2:7317053 Cma09g00785 Cma-Chr9:3798961 4.17E-169 dispersed
Cma09g00785 Cma-Chr9:3798961 Cma16g00646 Cma-Chr16:3361502 7.53E-136 dispersed
Cma09g00784 Cma-Chr9:3790911 Cma09g00785 Cma-Chr9:3798961 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00785 K00128 - csv:101219329 827.394