Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00851 ATGGCTGATGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGTTCTTTGGAGCTCATTGGAAGAGGATCTTTTGGTGATGTCTACAAAGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAACAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACTGATTACTATGGTTCTTATCTCCACCAGACGAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCCGTTGCAGATCTGCTGCAGTCTGGGCCACCTCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCCCAATTAACAAGGACAATATCAAGGAGAAAGACAATTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGACGGATACAATGAGAAGGCTGACATCTGGTCCCTAGGAATCACTGCTATTGAAATGGCGAAAGGGGAGCCTCCACTTTCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAGTCCACCGCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTTTGTCTGAAGAAAATACCTGCTGAGAGACCTAGTGCCAAAGAGCTTCTGAAGCATCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGACGATGAAGAATCACCAACAAATGGTCCTAGAACTATAGATGAATCATCAGACACTGTGAAAGTATCAAGAAATTTAAGAGAGGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCGAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTTTAGTAAAACCACCTCAAATTAGGGAACGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTCACTGGCAAGCTGCATCTGGAAATGCACCACGCGACATAGCAAAAAATGCTAAAGATTCATTCAATATGGGGGATGATAGTGAAGATGAAGAGTTATCTGTTAGCGGTACAGGAACCACTGTGGTCCGGTCTCCCAGAGGACCTCAAGCATCTACTCAATTTCATAATGGAAGCAATCCGTCTGGAAGCATACAAGCATATTTTGAGGACACATCTTATGGTGGTACTGTTGTTATGCGTGGTCAACGGGATGGTTCTGAGTCTCCTCGGACTCCAAAATCCAGATTTGGAATACAAGAAAGGAATTCAAGTTTGCCTCCTGAAGATAGTGCATCAAACCTTGCGGAGGCAAAGGCTGCAATTCAAGCAGGATTGAAGAAATCTAATGTAAGGGATAGACCAGCTCTCACTAAACGCAACGACAGGCAGGAGAATAGGAAAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTCTTTGATGCACCAAAAGCATTGGCAAAACCATCTCTACCGATTGACGATGAAGAAAGTAGAAAAGTAGTGTCATCTTCTGCACCATTAGCAGTTTTGTTTATGTCATCCTTGAAAGAGGTAGTTGTAGATGATTCGGAAGGATCGCCTGCCCGTACTGTAATTAATGCTCTTATAAGTATGGAACACCGAAAACCTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCGGAGGAATCTTCACTGAAGGATTTACAAGACTTGGCAACTCGCATATTCACCAAGGCAAAGACAGTTCCTGAAGTTGCACAAAATGTCACGGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCGAGGGATCTGAGTCCAGCTTAA 2085 42.73 MADVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQQEISVLSQCRSPYITDYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTIVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLSDLHPMRVLFIIPRESPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKDDEESPTNGPRTIDESSDTVKVSRNLREETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSLVKPPQIRERKPEIPYGQAAPSRVAESGHWQAASGNAPRDIAKNAKDSFNMGDDSEDEELSVSGTGTTVVRSPRGPQASTQFHNGSNPSGSIQAYFEDTSYGGTVVMRGQRDGSESPRTPKSRFGIQERNSSLPPEDSASNLAEAKAAIQAGLKKSNVRDRPALTKRNDRQENRKTEQTVSSSDSSRHSREFFDAPKALAKPSLPIDDEESRKVVSSSAPLAVLFMSSLKEVVVDDSEGSPARTVINALISMEHRKPGSCEVLVTKLLQKLASSEESSLKDLQDLATRIFTKAKTVPEVAQNVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4166682 4176448 - CmaCh09G008510.1 Cma09g00851 300856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00851 694 MobiDBLite consensus disorder prediction 469 487 - -
Cma09g00851 694 MobiDBLite consensus disorder prediction 648 669 - -
Cma09g00851 694 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 692 - -
Cma09g00851 694 CDD STKc_MST3_like 14 287 - -
Cma09g00851 694 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cma09g00851 694 MobiDBLite consensus disorder prediction 508 526 - -
Cma09g00851 694 MobiDBLite consensus disorder prediction 410 447 - -
Cma09g00851 694 MobiDBLite consensus disorder prediction 278 298 - -
Cma09g00851 694 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00851 694 Gene3D Transferase(Phosphotransferase) domain 1 12 304 - -
Cma09g00851 694 SUPERFAMILY Protein kinase-like (PK-like) 13 325 IPR011009 -
Cma09g00851 694 MobiDBLite consensus disorder prediction 278 545 - -
Cma09g00851 694 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 692 - -
Cma09g00851 694 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00851 694 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma09g00851 694 Coils Coil 41 68 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01216 Cma09g00851 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00851 Cma-Chr9:4166682 Cma18g01102 Cma-Chr18:9013246 6.30E-83 dispersed
Cma14g01648 Cma-Chr14:12324153 Cma09g00851 Cma-Chr9:4166682 1.84E-35 transposed
Cma01g01216 Cma-Chr1:8808292 Cma09g00851 Cma-Chr9:4166682 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68806 PF00069 Pkinase 9.40E-68 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00851 K08838 - csv:101214412 1187.94