Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00919 ATGCCTAAAGTTTGGTTTTCTCTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCCGAAGTGTATGATCCAAAGTGCAGGAAACAACTGAACACAATCACAACAAAGAAAGCAGCCAAAAAGTCAGGCTGTTCTTCCGGAAGGTCTGGCTGTTCAAGGTCCATAGCAAATCTCAAAGACGTCATCCATGGAAGCAAGAGGCACATCGAAAACCCGCCAATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCGATTGCTCATGAAGTAATACTAAGCAACTCAAAGTGTGAGCTCAAGATCACTGGTTTTGGAAGCTTCCACCAAGAGGGTGGGGGAAATTCTGATCTTAGCAGGGGTGGAGGTGGGAATTCGCCATTTTTCGGTACACTAAGGCCCGGAACTCCCGGTCCGGGGTCCAACTCCCCTTCTAGTACTACCTCCATATCTGCAACAAGGAAGCTTCCTTCTCTTTTGTCCTATAGAGATGGGAGTACTGCTAAATCCAAGGGAGGTGGGGAAGTTCGTACAAGCAAACGGTTCATGCCGCTAACTGAATCAAACGGTAGGACGTTTTCGATGGTTACTTGCCATAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACCGAGCTTGAGGAGGGCGATTCATCAAGGAAGATTGTCGAAATAATATGTCGAACAAACTTGTCGAAGTCGGAGAACAACAGTAACCGAATCGAACGAGTTTTCAAAGTTCACAATATGCAAAAAGCATTGGCAGGATTTGAAGAACACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCAAAGAAACACCCTCGATGCCTCGCGGACGGGAACGAGCTGCTGAGGTTTTACGGGACGACGTTAGCCTGCACTCTTGGACTAAACGGCTCGTCCACCCTCTGCATATCACAGAAATGCAGTGTCTGCAGAATTATAAGGAATGGTTTCTCAGCAGAGAAGGATATGAAAGAAGGAGTAGGAGTTTTCACGACTTCGACGAGCGGAAAAGCTTTCAAAACCATTGAAACAACCGAAGAAACCTCGGTGAAGAAAGCATTGATAATTTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCATTGGAGAACATCAAAGATATGGTTGGCCAAGCAGGGTTTGACTCTTTGGCTGGCAAAGTGGGATTACATTCCACCATTGAAGAGCTTTACTTGCTCAATCCTAAAGCTTTGCTTCCTTGTTTTGTTGTGATCTGCAAACCATGA 1296 46.68 MPKVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKAAKKSGCSSGRSGCSRSIANLKDVIHGSKRHIENPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEGGGNSDLSRGGGGNSPFFGTLRPGTPGPGSNSPSSTTSISATRKLPSLLSYRDGSTAKSKGGGEVRTSKRFMPLTESNGRTFSMVTCHKCGEQFCKLEAAESHHLSKHAVTELEEGDSSRKIVEIICRTNLSKSENNSNRIERVFKVHNMQKALAGFEEHREMVKIKASKLSKKHPRCLADGNELLRFYGTTLACTLGLNGSSTLCISQKCSVCRIIRNGFSAEKDMKEGVGVFTTSTSGKAFKTIETTEETSVKKALIICRVIAGRVHRPLENIKDMVGQAGFDSLAGKVGLHSTIEELYLLNPKALLPCFVVICKP 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4582915 4584503 - CmaCh09G009190.1 Cma09g00919 300924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00919 431 PANTHER - 3 431 - -
Cma09g00919 431 MobiDBLite consensus disorder prediction 114 156 - -
Cma09g00919 431 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 431 - -
Cma09g00919 431 ProSitePatterns Zinc finger C2H2 type domain signature. 200 221 IPR013087 -
Cma09g00919 431 Gene3D - 223 430 - -
Cma09g00919 431 SUPERFAMILY ADP-ribosylation 223 430 - -
Cma09g00919 431 MobiDBLite consensus disorder prediction 138 156 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01157 Cma09g00919 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00922 Cma-Chr4:4757288 Cma09g00919 Cma-Chr9:4582915 0 dispersed
Cma09g00919 Cma-Chr9:4582915 Cma16g00817 Cma-Chr16:4537298 2.33E-177 dispersed
Cma01g01157 Cma-Chr1:8450329 Cma09g00919 Cma-Chr9:4582915 0 wgd
Cma03g00511 Cma-Chr3:4962715 Cma09g00919 Cma-Chr9:4582915 2.42E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00919 - - csv:101213316 711.449