Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00921 ATGACATTTCCACAACTTATGGGTGTTGCAAAAAGGAGATGTTTGGTTGTTCTGGTGATTCTTGTCTGTGTTTCTTTAGCAACTTGCTTGAAGGATCACGAGGAAGAGGAGCTGATTCTGAGTCAACTAGCTGACCCAATTACTGGGGATATCGACACAGAGATGGCTGAGCTGTTACTGTTTAAATGCAACTTGGATTTGCTTCAGTTAAAGGAAGCTGCAGATGGTACTGAATTGTGCTTTGAAGAAAGACCCGATAGCACAAATGGTATTAATTTTGAATGTCAGGTGCTGACGAAAGGAAAAACAAACAGAATGCTAAGCGCCATGCATCCCCAGATGAAGCAAACTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTTTCTGGAAACGACTACAATTCTAAAGCTTGGTACCCCACATACCTGGAGTCATTGTTTTTGATGCCTGGTAGTTTTAGAAGGAAGTTAAGTTCCAGATGGCATCGAAGTGCTAAAGAAGTGTCGAAATCTTCAGATCTCGAACATCTTTCAATAAAACTTTCTAGCACAAGTAGTCAAAAAGAAAAGAAATCTGATCATCAACAAACAATTATCATTGCTGTTGTTGTAACAGCAACAGTGACTTTTATTATTGTAGCTCTGCTCTTTATATGCTATAATAGTATTAGCTCCAGAATGAAGCAAAATGATGAAAATCATGCAAGGCCTCTCCTAAGCTTGAGCATAAATTCTTCACCAAATTTTTCTGCCTTCGGGAATTCTTTTAAGGAAGACAAGTACATGAATCAAGCATCTAGCTTGAGTCAACACCAGAGAGCTCCATCTTTGGATGGTAGCCTGCAGCTTGTCTCTGATGGTGCACGTATTTCGATGCAGGGGCCTCCATCTTTTGAAGCTGCTGGAATTGTCAATAATTCATCTTTTGGATCAGTGAATTTGGCTGGGAGTTCTAATAATTTGCTGCCACCTCCTCCTGGAGCAGTGCCAGTCAACTCAGAGATTATGCCTCCTCTGAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACGCCCCAAGTCTTTTAAGCCTCCATCCAGCATGGCTACTCCTCCTCCGCCTCCACCACCTGCACCACCACCAGAACTTCCTGGAGATTCAGGTCACCCTCCCGGACCTCCTGGAAATTCAGGTCTTCCTCCTGTACCTCCTGGAAGTTCAGGTCTTCCTCCTGTACCTCCTGGAAATTCAGGTCTTCCTCCTGTACCTCCTGGAAGTTCAGGTCTCCCTCCTGTACCTCCTGGAAATTCAGCTGTCCCTCCTGTACCTCCTGGAAATTCAGGTCGCCCTTCTGGACCTCCTCCACCTCCACCACCTGGAGCCAACAGGGCAGGCCCTCGCCCACCACCACCTCCCGGAAGTGGTAATGCTCCTCGGCCACCGCCATTTGCACCCAAAGGTGGAAATGCACCTCGACCTCCAAGGGGTTCTGCTTTAGGTGGTGATAATGGTATGGAAGATTCGGGTGTCCCCAAAGCCAAATTGAAACCGTTTTTCTGGGACAAAGTTCTTGCAAACCCAGATAATACCATGGTCTGGCATCAGATAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATGCACCAGCAGATAAAAACAAAACTGATGGTAAGAAGGAGCCATCATCAAAAGATCCTGTACAGCAGTTCATTCAGATCATTGATGCAAAGAAAGCGCAAAATCTGTCCATTCTTTTACGAGCACTGAATGTGACAAGAGAAGAAGTTTGTGATGCACTTCATGAAGGAACTGATCTTCCTGCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTCAAGCTTAGACTGTTCAGTGGGGAGACTTCTCAACTCGGAAATGCCGAGCGGTTCCTTAAAACGATAGTCGATATCCCATTTGCTTTCAAAAGGATGGAATCTCTGCTATTCATGAGCACTATTCAGGAGGACATCGCCATCACTAAAGAGTCCTTTGTTAACCTGGAGATCGCTTGCAAGGAACTTAAGAGCAGCAGGCTGTTCCTCAAACTGCTAGAAGCTGTTCTTAAGACGGGTAATCGGATGAACGATGGAACTTTTCGAGGTGGCGCGCAAGCATTCAAATTGGACACTCTCTTAAAATTGTCAGATGTGAAAGGAAAAGATGGGAAGACTACACTATTACACTTTGTAGTTCAGGAGATAATCCGCACAGAAGGGATAAGAGCTGCCAGGAATGCCACTGGAAGCCAAAGCTTCTCAAGCACCTCATCAAAGGAGATGCTGGATGGAACTACTCACGATCCAGACGAGCATTTCCGTAACTTGGGTCTTGAGGTCGTGTCGGGGTTGAGCGGCGAACTTCAGAATGTGAAGAAAGCAGCGACCATAGATGCCGATGCCTTGACTGGTACCGTTTCTAAACTTGGCCATGGACTGTTGAGTTCAAGAGACTTTTTGAACAAAGACATGGAGAATCTAGGTGAAGAAAGTAGATTTCATCAGACACTGAAAAGCTTTGTGCAGAATGCTGAGGTTACTATCATGGCTCTCTTGGCAGAAGAAAAAAAGATCATGGAAATGGTGAAAAGCACGGGTGATTACTTCCATGGAAATGCTGGGAAGGATGAGGGCTTAAGGTTGTTTGTAATAGTGCGAGATTTCTTGATAATGATAGATAAGACATGCCGGGAGATAAAGGATGCACAGAAAAAACAGGCAAAGCAGGCGAAGGGACACAGAAAGGCAGCATCTTCTTCTGATATCAATCCCTCCCTTCCGTCTTCCGATACCAATCAACCCCCGTCCTCGTCTTCCGATACCAATCAACCCCCGTCCTCGTCTCAAGACACCAATCAAACCACGTCGACGTCTCAAGACACCAATCAAACCACGTCGTCGTCTCCTGATACCAATCAACCCCCATCCTCGTCTTCCGATACCAATCAACCCCCGTCCTCGTCTTCCGATACCAATCAACCCCCGTCCTCGTCTTCCGATACCAATCAACCCACGTCCTCGTCTCAAGACACCAATCAAACCACGTCGTCGTCTCAAGACACCAATCAAACCACGTCGTTGTCTCAAGACACCAATCCACCCATGTCGTCGTCTCAAGACACCAATCCACCCCCGTCCTCGTCTCCTGATGCCAATCAACCCCCTTCAGCTCCAGTTTCTGATCCACGCCACCCACCTCCTCCCCCATCATCGTCTTCTGATATCAATCAACCCCCTTCAGCTCCAGCTTCTGGTCCACCCCACCCACCTCCTCCCCCATCATCGTCTTCTTATACCAACCAACCCCCTTCAGCTCCAATTTCTTATCCACGCCACCCACCTCCCCCATCATCGTCTTCTGATACCAATCAGCCCCCTTCAGCTCCAGTTTCTGATCCACGCCACCCACCTCCTCCCCCATCATCGTCTTCTGATACCAATCAACCCCCTTCAGCTCCAGTTTCTGGTCCACCCCACCCACCTCCTCCCCCATCATCTTCTTATACCAACCAACCCCCTTCAGCTCCAGTTTCTGATCCACGCCACCCACCTCCCAATCTAAACCAGCTGATTTTCCCTGCAATTACTGATCGTCGGATGGGTAGCTCAAGTTCAAGTTCAGATGATGAAAGTCCATAG 3681 47.03 MTFPQLMGVAKRRCLVVLVILVCVSLATCLKDHEEEELILSQLADPITGDIDTEMAELLLFKCNLDLLQLKEAADGTELCFEERPDSTNGINFECQVLTKGKTNRMLSAMHPQMKQTLLDCLRKNFHVSGNDYNSKAWYPTYLESLFLMPGSFRRKLSSRWHRSAKEVSKSSDLEHLSIKLSSTSSQKEKKSDHQQTIIIAVVVTATVTFIIVALLFICYNSISSRMKQNDENHARPLLSLSINSSPNFSAFGNSFKEDKYMNQASSLSQHQRAPSLDGSLQLVSDGARISMQGPPSFEAAGIVNNSSFGSVNLAGSSNNLLPPPPGAVPVNSEIMPPLKPPPGRAVPLPPERPKSFKPPSSMATPPPPPPPAPPPELPGDSGHPPGPPGNSGLPPVPPGSSGLPPVPPGNSGLPPVPPGSSGLPPVPPGNSAVPPVPPGNSGRPSGPPPPPPPGANRAGPRPPPPPGSGNAPRPPPFAPKGGNAPRPPRGSALGGDNGMEDSGVPKAKLKPFFWDKVLANPDNTMVWHQIKAGSFQFNEEMIETLFGYAPADKNKTDGKKEPSSKDPVQQFIQIIDAKKAQNLSILLRALNVTREEVCDALHEGTDLPAELLENLLRMAPTPEEELKLRLFSGETSQLGNAERFLKTIVDIPFAFKRMESLLFMSTIQEDIAITKESFVNLEIACKELKSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAARNATGSQSFSSTSSKEMLDGTTHDPDEHFRNLGLEVVSGLSGELQNVKKAATIDADALTGTVSKLGHGLLSSRDFLNKDMENLGEESRFHQTLKSFVQNAEVTIMALLAEEKKIMEMVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMIDKTCREIKDAQKKQAKQAKGHRKAASSSDINPSLPSSDTNQPPSSSSDTNQPPSSSQDTNQTTSTSQDTNQTTSSSPDTNQPPSSSSDTNQPPSSSSDTNQPPSSSSDTNQPTSSSQDTNQTTSSSQDTNQTTSLSQDTNPPMSSSQDTNPPPSSSPDANQPPSAPVSDPRHPPPPPSSSSDINQPPSAPASGPPHPPPPPSSSSYTNQPPSAPISYPRHPPPPSSSSDTNQPPSAPVSDPRHPPPPPSSSSDTNQPPSAPVSGPPHPPPPPSSSYTNQPPSAPVSDPRHPPPNLNQLIFPAITDRRMGSSSSSSDDESP 1226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4588568 4594668 - CmaCh09G009210.1 Cma09g00921 300926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00921 1226 PANTHER FORMIN-LIKE PROTEIN 3 436 938 - -
Cma09g00921 1226 PANTHER FORMIN-LIKE PROTEIN 3 11 134 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 930 1060 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 917 1226 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 761 780 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 325 484 - -
Cma09g00921 1226 SMART it6_source 500 920 IPR015425 -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 761 776 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 325 505 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 1061 1113 - -
Cma09g00921 1226 Gene3D Formin, FH2 domain 505 937 IPR042201 -
Cma09g00921 1226 PANTHER FORMIN-RELATED 436 938 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma09g00921 1226 MobiDBLite consensus disorder prediction 1120 1136 - -
Cma09g00921 1226 PANTHER FORMIN-RELATED 11 134 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cma09g00921 1226 Pfam Formin Homology 2 Domain 506 905 IPR015425 -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 1143 1201 - -
Cma09g00921 1226 MobiDBLite consensus disorder prediction 1212 1226 - -
Cma09g00921 1226 SUPERFAMILY Formin homology 2 domain (FH2 domain) 449 924 - -
Cma09g00921 1226 ProSiteProfiles Formin homology-2 (FH2) domain profile. 500 932 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01155 Cma09g00921 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00921 Cma-Chr9:4588568 Cma19g00185 Cma-Chr19:1217972 1.90E-117 dispersed
Cma01g01155 Cma-Chr1:8438441 Cma09g00921 Cma-Chr9:4588568 0 wgd
Cma02g00145 Cma-Chr2:691274 Cma09g00921 Cma-Chr9:4588568 0 wgd
Cma20g00639 Cma-Chr20:2975163 Cma09g00921 Cma-Chr9:4588568 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00921 - - csv:101213072 769.615