Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00938 ATGATCTGTGCTGTGAAACCATCATCTAGAGCTATCCATTGCTCCGATGGTGTTATTCGGAGCAAAATCTCTGTTCCTTCTAAACGATCCTTGTTTCTTCCTCCTCTTCCGATGCAAAAACCTCCAAAATCCGCTGTTTCTGTTCATAAGGCAGTTCATGTTTCTTCGCTTGAGAATTTCGGATCACTTCGGGTTCGTAAACCTAATCCGATCAAATGCGAAGCTTACGAGGCTGATCGATCGCAGCCGATCGAATCGAGCATCGATTTGTCGCAAAATCAAGCCCGTTCCGAGGCGGCGAAGAAGTTGAAAATCGGATCATACTTCGCTCTTTGGTGGGCTTTGAACGTAGTTTTCAATATCTATAACAAGAAAGTGTTGAACGCTTACCCATATCCTTGGCTGACCTCGACTCTGTCGCTTGCCGCCGGATCTCTGATCATGTTGATATCATGGATGACAAAAATTGCCGAGGCGCCTAAAACTGATATCGAATTTTGGAAGTCTCTGCTACCTGTTGCTGTTGCCCATACAATTGGACATGTTGCAGCAACTGTGAGTATGTCTAAGGTTGCGGTTTCATTCACTCACATAATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCGAGGTTTTTGTTGGGTGAGACGTTCCCGCTTCCTGTCTACTTGTCGCTCCTTCCGATCATTGGTGGGTGTGCTCTTGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCAAAGAAGGGCATGAAGGGAAAATCCGTTAGCGGGATGAACTACTATGCGTGTTTATCGATTTTGTCTTTGTTACTCTTGACGCCATTTGCGTTTGCTGTGGAGGGACCGCAACTGTGGGCAGAGGGATGGAAAACAGCTATCTCTCAAATCGGACCTCATTTCGTTTGGTGGGTTGCAGCGCAAAGTATATTCTACCATCTCTATAACCAGGTGTCTTACATGTCCTTGGACGAGATATCTCCCTTGACGTTTAGCGTTGGAAACACCATGAAACGTATATCCGTCATAGTTTCTTCCATCATCATCTTCCGCACACCCGTGCAGCCAGTCAACGCTCTCGGAGCAGCCATTGCAGTTCTCGGAACCTTCATATACTCGCAGGTGCGCCTTTGCTCCTAG 1197 46.2 MICAVKPSSRAIHCSDGVIRSKISVPSKRSLFLPPLPMQKPPKSAVSVHKAVHVSSLENFGSLRVRKPNPIKCEAYEADRSQPIESSIDLSQNQARSEAAKKLKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTKIAEAPKTDIEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPQLWAEGWKTAISQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQVRLCS 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4699608 4702554 + CmaCh09G009380.1 Cma09g00938 300943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00938 398 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 27 394 - -
Cma09g00938 398 PANTHER SOLUTE CARRIER FAMILY 35 27 394 - -
Cma09g00938 398 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 103 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cma09g00938 398 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Cma09g00938 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma09g00938 Cma16g00853 CCT
Cma09g00938 Cma16g00853 ECH
Cma01g01142 Cma09g00938 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00938 Cma-Chr9:4699608 Cma18g01109 Cma-Chr18:9049595 1.58E-78 dispersed
Cma01g01142 Cma-Chr1:8353848 Cma09g00938 Cma-Chr9:4699608 0 wgd
Cma16g00853 Cma-Chr16:5052238 Cma09g00938 Cma-Chr9:4699608 0 wgd
Cma03g00528 Cma-Chr3:5032836 Cma09g00938 Cma-Chr9:4699608 0 wgd
Cma07g00303 Cma-Chr7:1339664 Cma09g00938 Cma-Chr9:4699608 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00938 K15283 - csv:101220046 683.715