Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00955 ATGGTTGAATTAGATTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACGCCAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTGAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTTCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGAGTCTGTTGATTTATGCTTTGCTTTTGGGGTATGTTCTGTTCTTAGTTTCTAAGAGTCGGTGTGTTTTAGTCTATTTGTGTTGTTGTCAATGGATTCTGTGA 435 42.76 MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGSLLIYALLLGYVLFLVSKSRCVLVYLCCCQWIL 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4806670 4807328 - CmaCh09G009550.1 Cma09g00955 300960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00955 144 Gene3D - 2 112 - -
Cma09g00955 144 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 111 - -
Cma09g00955 144 SUPERFAMILY eIF1-like 4 111 IPR036877 GO:0003743|GO:0006413
Cma09g00955 144 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Cma09g00955 144 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 111 IPR005874 GO:0003743
Cma09g00955 144 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Cma09g00955 144 CDD eIF1_SUI1 29 111 IPR005874 GO:0003743
Cma09g00955 144 PANTHER BNAA10G09260D PROTEIN 1 111 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01129 Cma09g00955 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00955 Cma-Chr9:4806670 Cma19g00930 Cma-Chr19:8319318 2.20E-59 dispersed
Cma01g01129 Cma-Chr1:8277250 Cma09g00955 Cma-Chr9:4806670 2.12E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00955 K03113 - csv:101202908 224.172