Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g00981 ATGCCGGAGAAATCGAGCCATAATGTTGTTTTAGAGCCTCGTTTGGTGGCTAGGAAGTTCCTGGCTAGGCCTCAGCATGAAGGGATGGGTGCCATTGTTCGAAGGAGCATTGGAAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAGTTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATAGGAGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGGTACCCAAAAGGGCCTCCAGCTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAACCAAACTACCAAGAAGTTTCAAGCAAGGAAATCCCTGAAGCTACCAAAGATGGAGTGATAGTGAAAGTAATAGCCGGTGAGGCATTGGGAGCAAAGTCACCAATCTACACAAGAACACCAACCATGTACTTAGACATCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCCGATCCCATCGTCCTGGAACGCGTTCGTTTACGTTCTTGAGGGCGAAGGCATATTCGGCAGTTCGAAGGCGACATTGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGAGGTGTGGAATAAGTCAGCTAAGGCTCTCAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGGCTGTTGTGCAATTTGGTCCATTTGTGATGAACACTCAAGAGGAAATTGACCAAACAATTGATGATTTTGATAATTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCTCTTGGGTTCTAA 906 46.03 MPEKSSHNVVLEPRLVARKFLARPQHEGMGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDGVIVKVIAGEALGAKSPIYTRTPTMYLDITLKPKAHLQQPIPSSWNAFVYVLEGEGIFGSSKATLTTAHNLLLLGFGDGLEVWNKSAKALRFILVGGEPLSEAVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 301
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 4993888 5000316 + CmaCh09G009810.1 Cma09g00981 300986
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma09g00981 301 CDD cupin_pirin_N 31 128 - -
Cma09g00981 301 PIRSF Pirin 12 292 IPR012093 -
Cma09g00981 301 PANTHER - 4 299 - -
Cma09g00981 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Cma09g00981 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Cma09g00981 301 CDD cupin_pirin_C 176 252 - -
Cma09g00981 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Cma09g00981 301 PANTHER PIRIN-RELATED 4 299 IPR012093 -
Cma09g00981 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Cma09g00981 301 Pfam Pirin 34 126 IPR003829 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma09g00981 Cma16g00937 CCT
Cma01g01099 Cma09g00981 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00981 Cma-Chr9:4993888 Cma16g00937 Cma-Chr16:7193013 1.12E-165 dispersed
Cma01g01099 Cma-Chr1:8058082 Cma09g00981 Cma-Chr9:4993888 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g00981 K06911 - csv:101216351 569.311