Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g01000 ATGGCCCGCCATCTCCTCCTCTCCATTTTCCTCCTCCTCCTCCTCTCCTCCGCCGTCGCCCACAGCGGCCACCACGACGATGACGATGCCGGAGATGCTGAGGCCACTCCAAACCTCCGCTCCAAGCCGCTCATTCTCGTTAAGATCGGCTGTCTTATTCTCATCTTTTTCGGCACTTTCATCCCTGGAATCTCTCCCTGTTTCTTCAAATGGAACGATGGATTCCTTGTCCTTGGTACTCAGTTTGCTGGCGGCGTCTTCTTTGGCACTGCTATGATGCATTTCCTCTCCGATGCTAATGAGACGTTTGGCGATTTGACTGATAAGGCGTATCCGTTCGCGTTTATGCTTGCTTGTGTAGGGTTTTTGATGACTATGGCGGCGGATTGTGTGATATCGTATCTCTATCGTAAACAGGACGGTGATTCTTCGATTGATGTTGAGCTTCGAGGAACTGCAATTTCACCCTCAAAGCTTCAGGTCCATAATGGCAGCAATGGCCATAACCCACATCCACACGCAGCTATCACAACAATGGGTTCATTTGGGGACAGCATTTTGCTAATCGTTGCGTTGTGCTTTCACTCCGTGTTCGAAGGCATTGCCATCGGTGTTGCAGAGACTGAAGCCGATGCCTGGAGAGCCCTATGGACGATCTCCCTCCACAAGGTTTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGCCCCTTGTTGTCGAGCGCTGCCTACTCCTTTGCTTTTGCCATCTCGAGCCCCATTGGCATCGCTATCGGACTCATAATCGACGCCACGACAGAAGGCGCGGTTGCAGATTGGATCTTTGCCATCTCGATGGGGCTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCAAAGGGATACACGGCCAAGGATTCAGTTGGGGTGGTCAATCCCAATCACAAGTTTGTTGCTGTGCTTTTAGGAATTGGGATTATTGCTGTTGTAATGATTTGGGACACCTGA 1014 50.69 MARHLLLSIFLLLLLSSAVAHSGHHDDDDAGDAEATPNLRSKPLILVKIGCLILIFFGTFIPGISPCFFKWNDGFLVLGTQFAGGVFFGTAMMHFLSDANETFGDLTDKAYPFAFMLACVGFLMTMAADCVISYLYRKQDGDSSIDVELRGTAISPSKLQVHNGSNGHNPHPHAAITTMGSFGDSILLIVALCFHSVFEGIAIGVAETEADAWRALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGLIIDATTEGAVADWIFAISMGLACGVFIYVSINHLLSKGYTAKDSVGVVNPNHKFVAVLLGIGIIAVVMIWDT 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5100852 5103550 - CmaCh09G010000.1 Cma09g01000 301005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g01000 337 Pfam ZIP Zinc transporter 46 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma09g01000 337 PANTHER ZINC TRANSPORTER 11 23 336 - -
Cma09g01000 337 PANTHER ZINC/IRON TRANSPORTER 23 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g01000 Cma-Chr9:5100852 Cma02g00735 Cma-Chr2:4458402 4.63E-11 dispersed
Cma09g01000 Cma-Chr9:5100852 Cma12g00640 Cma-Chr12:3405585 1.81E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g01000 K14709 - csv:101208105 542.347