Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g01056 ATGGCCACCACCGGAGACACACGGCGGAATGAGTTCTCCATCTCCACGCTGCTGCTTCTCTCACTCTCCATCGTCGTCGTCTTCCTCCTCCCTGTTTCCTCCGCCGGCGAAACTTCCTCCTTCTTTAACCACCGCAAGATGTCCGCCGTTGGAACTCCTTCCATCTCCACCTACGCCGTCATCTTCGACGCTGGAAGCTCCGGCAGCCGCGTCCATGTCTTCCACTTCGATCGGAACCTGGATCTCCTCTTCATTGGTTCAGACATTGAGGTTTTCTCACAGATAAAGCCAGGGCTGAGTTCGTACGCTGATGATCCTCAGAAAGCCGCGGATTCTTTAATTCCTTTACTGGAGAAAGCAGAAATTGCTGTTCCTGAGAAACTGCAATCCGTGACGCCGATTCGCCTCGGAGCGACGGCAGGGCTTCGGTTCTTGGAAGGCGACAGATCTGAGAGGATTTTGGAAGCGGTTAGGAATCTTCTGAAAACGAAGAGCGGATTCATGTACGGAGCGGATTCGGTTTCGATTTTGGACGGAAATCAAGAAGGTGCTTATCAATGGTTGACAATAAACTATTTGCTGGAGAATTTGGGGAAGAGATACTCTAATACAATGGGAGTAATTGACCTTGGAGGTGGCTCTGTTCAAATGGCATATGCAATCTCTGATGAAGATGCAGCCAAGGCGCCCATTTCTTCTGATGGCTACTCCAAATTTGTTCAGAAATTTTACCTCAAGGGCGCTAATTATAACCTCTACGTGCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTTGAGATCTTGAAGGTGACCGAAGAGCTTGGCAACCCCTGCATTTTAGCTGGCTATCAAGGTACATACGCATACGGGGGAAAGGAGTACAAAGCATCAGCCCCTCGATCAGGGTCGGGCTTCGCTCGTTGCCGGAGTGTAATTCTGGAGGCACTGAATATCAACAAATCATGTGGGTATAACGATTGCAGCTTTGATGGTATATGGAGTGGCGGCGGAGGAGCCGGCGTGAAGAACCTCTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCGGGTTTCATAGATTCAGACAAGCCAGACGCCATTGTGAAGCCCATTGATTTCAAGAGAGCTGCGAGGATTGCTTGTCAAACCAAGTTTGTTGATGCAAAGGTCAAATACCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGCATGGATCTCGTGTACGAGTACACGCTTCTTGTTGATGGATTCGGAATTGATTCTCGGAAGAGTATCACATTGGTGAAGCAGGTAGCATATCATGGTTCTCTTGCAGAGGCGGCATGGCCATTGGGCAATGCTGTAGCCATCGCCTCATCCTCAAAACGCAAGAAATTTTCCAATCTCCTTTTGATTGAGCGGATAGACGATTTTTGCTCTGGCTTGGAGTCTCACGGGAAGTTCACGTGA 1461 48.8 MATTGDTRRNEFSISTLLLLSLSIVVVFLLPVSSAGETSSFFNHRKMSAVGTPSISTYAVIFDAGSSGSRVHVFHFDRNLDLLFIGSDIEVFSQIKPGLSSYADDPQKAADSLIPLLEKAEIAVPEKLQSVTPIRLGATAGLRFLEGDRSERILEAVRNLLKTKSGFMYGADSVSILDGNQEGAYQWLTINYLLENLGKRYSNTMGVIDLGGGSVQMAYAISDEDAAKAPISSDGYSKFVQKFYLKGANYNLYVHSYLRYGLQAARVEILKVTEELGNPCILAGYQGTYAYGGKEYKASAPRSGSGFARCRSVILEALNINKSCGYNDCSFDGIWSGGGGAGVKNLYVASFFFDKAAQAGFIDSDKPDAIVKPIDFKRAARIACQTKFVDAKVKYPNVYSSDLQFVCMDLVYEYTLLVDGFGIDSRKSITLVKQVAYHGSLAEAAWPLGNAVAIASSSKRKKFSNLLLIERIDDFCSGLESHGKFT 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5518678 5525662 - CmaCh09G010560.1 Cma09g01056 301061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g01056 486 Pfam GDA1/CD39 (nucleoside phosphatase) family 56 462 IPR000407 GO:0016787
Cma09g01056 486 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 457 IPR000407 GO:0016787
Cma09g01056 486 Gene3D Exopolyphosphatase. Domain 2 178 436 - -
Cma09g01056 486 CDD NBD_sugar-kinase_HSP70_actin 60 219 - -
Cma09g01056 486 PANTHER APYRASE-LIKE PROTEIN 16 457 - -
Cma09g01056 486 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 177 192 IPR000407 GO:0016787
Cma09g01056 486 Gene3D - 58 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00860 Cma-Chr5:5916518 Cma09g01056 Cma-Chr9:5518678 9.31E-42 dispersed
Cma07g01174 Cma-Chr7:6438841 Cma09g01056 Cma-Chr9:5518678 6.89E-175 dispersed
Cma09g01056 Cma-Chr9:5518678 Cma13g00875 Cma-Chr13:7124492 4.29E-20 dispersed
Cma09g01056 Cma-Chr9:5518678 Cma03g00250 Cma-Chr3:3555555 4.26E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g01056 K14641 - zju:107404044 524.242