Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g01067 ATGGCGTTTGACTTGAAGATGGTACCTTCGGGGCCATCTACTCCCGTTGGTGGTGCGCAGTCTGTTCCAACATCGCTTTTGAGATCAAATTCCGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTGAATCAGTCATTTGGGAATGGAGTTCCAAATTCTGGGTCCTCAGGCCTTGGGAACGGCCAACGAGTAGGTATGGACCCTGCTACCGAGTTAGATCCATTTTCACTTGTTGGCAATGGTATGAACTTCAACAATACCCCGTCGTCATTGGTGGCATCAAATACACCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAACAGTTTTCAAACCATCCTAGCAGCCAAATAATACCCAATCAACAGCAGCCACAGCAAATTGAACCCCAGAACTTCCAACATAGTCAGCACTCAATGCAACAGTTCGCTTCCTCTAATAACACACAGCAGTCACAGCAGCAACAACAACACCAATTCCAACCTATTCGGGGAAGTTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGTTGCAGTCGATGAGGAATCTTGGCCCTGTGAAACTGGAACCGCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAATCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAACAACAACAGCAACAACAACAGTTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTACTGCTGCGCAGATTAGTCTTTTGCAACACCAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTTCCCTTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCCCGACGTTTAACAAATTATATGTGCTCACAACAGAAGAGGCCTGAAGACAACAATATTGAGTTCTGGAGGGAATTTGTTGCAGATTTCTTCGCTCCCCATGCAAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCGCAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTCCCAAGGCTGTTCAAGATCAAGTATGAGAGTGGAACTCTTGAAGAGCTTCTCTATGTTGATATGCCCCGTGAATATCATAATGCATCTGGACAAATTGTCCTAGATTACGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAGTAGTTTTTTCTCCAGACTTGAAGATATGCTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTTATACCGCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCGTCATCTAACTTGTCTACTTCAGAGTTGCAAAATAACTGCAACATGTTTGTGGGCTCTGCCAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAACGACTTGGGATATACGAAGAGATATATCCGGTGCCTTCAGATATCGGAAGTCGTCAACAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTATGACTGGGCCAATTGAGAGTTTGGCTAAGTTTCCACGGAAGACGAATGCTTCACCATGCTTCCACAGCCAAGCTCAGAACGCCGAGCAACAATTACCTCAGCCTCAGCAAACAATTGATCAAAATGCAAATGGTGACCAAAGCTCGGCCCAGGCTGCTGCTATGCAGCTTGCTGCTAACAATGGCGTTCCAAGTGCAAATAACTCTGCTAATCCGACATCAACATCATCTCCTGCTAGTGCAATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATGAATAGCGCTGGCAGCCCTTACGCTGGGAATTCTGCGCAAATACCGTCCCCGGGTTCCTCCACGGTTGCTCAGGCACAAGCAAACTCCTCATTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAGTCATCAATTGGCACTGCAACCGCTACTAATCACATGAGTGCCACTAATTCTCCAGCAAATGTTCCCTTGCAACAGCAGCCAACACACTCTTCTGAAGCCGATCAAAATGATTCCCAAAGCTCTGTACAAAAGATCATTCAGGAATACATGATGTCGAACCATCTAAACGGGATGAACACAATGACTGGCGTTTCCTCTCTAGGAGATGATGTGAAAACCGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGAAACGGTCTCATTGGAAGTGGAACTGCCAATGGGGTTTCTGGTATGAGGAGCACAGGATATGGCTCGATGGGCGCAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAACAACTCTATTTCGAATGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGTGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCTATTCGATTATTGA 2745 45.43 MAFDLKMVPSGPSTPVGGAQSVPTSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSFGNGVPNSGSSGLGNGQRVGMDPATELDPFSLVGNGMNFNNTPSSLVASNTPNPGSSSQVSGQQFSNHPSSQIIPNQQQPQQIEPQNFQHSQHSMQQFASSNNTQQSQQQQQHQFQPIRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQLLSMSRQSSQAATAAQISLLQHQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNFPLRSPVKPVYEPGMCARRLTNYMCSQQKRPEDNNIEFWREFVADFFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRVVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTSELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYIRCLQISEVVNSMKDLIDYSQETMTGPIESLAKFPRKTNASPCFHSQAQNAEQQLPQPQQTIDQNANGDQSSAQAAAMQLAANNGVPSANNSANPTSTSSPASAIVGLLHQNSMNSRQQNSMNSAGSPYAGNSAQIPSPGSSTVAQAQANSSFQSPTLSSPNNHPQSSIGTATATNHMSATNSPANVPLQQQPTHSSEADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSLGDDVKTVNGMLPGNNIMSLNGRNGLIGSGTANGVSGMRSTGYGSMGAGLAQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLLFDY 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5608108 5618161 + CmaCh09G010670.1 Cma09g01067 301072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g01067 914 MobiDBLite consensus disorder prediction 687 779 - -
Cma09g01067 914 MobiDBLite consensus disorder prediction 620 649 - -
Cma09g01067 914 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 7 914 - -
Cma09g01067 914 MobiDBLite consensus disorder prediction 109 190 - -
Cma09g01067 914 MobiDBLite consensus disorder prediction 76 190 - -
Cma09g01067 914 MobiDBLite consensus disorder prediction 1 22 - -
Cma09g01067 914 Pfam LIM-domain binding protein 349 603 IPR029005 -
Cma09g01067 914 MobiDBLite consensus disorder prediction 76 90 - -
Cma09g01067 914 PANTHER LIM DOMAIN-BINDING PROTEIN 7 914 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02418 Cma-Chr4:16680622 Cma09g01067 Cma-Chr9:5608108 0 dispersed
Cma09g01067 Cma-Chr9:5608108 Cma15g00631 Cma-Chr15:2982340 0 dispersed
Cma01g01019 Cma-Chr1:7481980 Cma09g01067 Cma-Chr9:5608108 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g01067 - - csv:101221714 1376.69