Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g01067 | ATGGCGTTTGACTTGAAGATGGTACCTTCGGGGCCATCTACTCCCGTTGGTGGTGCGCAGTCTGTTCCAACATCGCTTTTGAGATCAAATTCCGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCCCCACGGACTCAGTTTAGCAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTGAATCAGTCATTTGGGAATGGAGTTCCAAATTCTGGGTCCTCAGGCCTTGGGAACGGCCAACGAGTAGGTATGGACCCTGCTACCGAGTTAGATCCATTTTCACTTGTTGGCAATGGTATGAACTTCAACAATACCCCGTCGTCATTGGTGGCATCAAATACACCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAACAGTTTTCAAACCATCCTAGCAGCCAAATAATACCCAATCAACAGCAGCCACAGCAAATTGAACCCCAGAACTTCCAACATAGTCAGCACTCAATGCAACAGTTCGCTTCCTCTAATAACACACAGCAGTCACAGCAGCAACAACAACACCAATTCCAACCTATTCGGGGAAGTTTATGTGGTGTTGGACCTGTCAAGTTAGAGCCTCAAATGAATAATAATGATCTTCAAGGGCAGCAACTACAGCAGCAGCAGCAGTTGCAGTCGATGAGGAATCTTGGCCCTGTGAAACTGGAACCGCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAATCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAACAACAACAGCAACAACAACAGTTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTACTGCTGCGCAGATTAGTCTTTTGCAACACCAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTTCCCTTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCCCGACGTTTAACAAATTATATGTGCTCACAACAGAAGAGGCCTGAAGACAACAATATTGAGTTCTGGAGGGAATTTGTTGCAGATTTCTTCGCTCCCCATGCAAAAAAGAAATGGTGCGTTTCCATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCGCAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTCCCAAGGCTGTTCAAGATCAAGTATGAGAGTGGAACTCTTGAAGAGCTTCTCTATGTTGATATGCCCCGTGAATATCATAATGCATCTGGACAAATTGTCCTAGATTACGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAGTAGTTTTTTCTCCAGACTTGAAGATATGCTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTTATACCGCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCGTCATCTAACTTGTCTACTTCAGAGTTGCAAAATAACTGCAACATGTTTGTGGGCTCTGCCAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAACGACTTGGGATATACGAAGAGATATATCCGGTGCCTTCAGATATCGGAAGTCGTCAACAGTATGAAGGACTTGATAGATTACAGCCAAGAAACTATGACTGGGCCAATTGAGAGTTTGGCTAAGTTTCCACGGAAGACGAATGCTTCACCATGCTTCCACAGCCAAGCTCAGAACGCCGAGCAACAATTACCTCAGCCTCAGCAAACAATTGATCAAAATGCAAATGGTGACCAAAGCTCGGCCCAGGCTGCTGCTATGCAGCTTGCTGCTAACAATGGCGTTCCAAGTGCAAATAACTCTGCTAATCCGACATCAACATCATCTCCTGCTAGTGCAATTGTTGGGTTACTCCACCAGAACTCCATGAACTCCAGACAGCAGAACTCTATGAATAGCGCTGGCAGCCCTTACGCTGGGAATTCTGCGCAAATACCGTCCCCGGGTTCCTCCACGGTTGCTCAGGCACAAGCAAACTCCTCATTCCAATCGCCTACATTGTCCTCACCTAACAATCACCCACAGTCATCAATTGGCACTGCAACCGCTACTAATCACATGAGTGCCACTAATTCTCCAGCAAATGTTCCCTTGCAACAGCAGCCAACACACTCTTCTGAAGCCGATCAAAATGATTCCCAAAGCTCTGTACAAAAGATCATTCAGGAATACATGATGTCGAACCATCTAAACGGGATGAACACAATGACTGGCGTTTCCTCTCTAGGAGATGATGTGAAAACCGTTAACGGGATGTTGCCAGGAAACAACATTATGAGTCTCAATGGACGAAACGGTCTCATTGGAAGTGGAACTGCCAATGGGGTTTCTGGTATGAGGAGCACAGGATATGGCTCGATGGGCGCAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAACAACTCTATTTCGAATGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGTGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCTATTCGATTATTGA | 2745 | 45.43 | MAFDLKMVPSGPSTPVGGAQSVPTSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNTPSMSSLLNQSFGNGVPNSGSSGLGNGQRVGMDPATELDPFSLVGNGMNFNNTPSSLVASNTPNPGSSSQVSGQQFSNHPSSQIIPNQQQPQQIEPQNFQHSQHSMQQFASSNNTQQSQQQQQHQFQPIRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQLLSMSRQSSQAATAAQISLLQHQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNFPLRSPVKPVYEPGMCARRLTNYMCSQQKRPEDNNIEFWREFVADFFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRVVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLSTSELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYIRCLQISEVVNSMKDLIDYSQETMTGPIESLAKFPRKTNASPCFHSQAQNAEQQLPQPQQTIDQNANGDQSSAQAAAMQLAANNGVPSANNSANPTSTSSPASAIVGLLHQNSMNSRQQNSMNSAGSPYAGNSAQIPSPGSSTVAQAQANSSFQSPTLSSPNNHPQSSIGTATATNHMSATNSPANVPLQQQPTHSSEADQNDSQSSVQKIIQEYMMSNHLNGMNTMTGVSSLGDDVKTVNGMLPGNNIMSLNGRNGLIGSGTANGVSGMRSTGYGSMGAGLAQASMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLLFDY | 914 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5608108 | 5618161 | + | CmaCh09G010670.1 | Cma09g01067 | 301072 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 687 | 779 | - | - | |
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 620 | 649 | - | - | |
Cma09g01067 | 914 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 7 | 914 | - | - | |
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 109 | 190 | - | - | |
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 76 | 190 | - | - | |
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cma09g01067 | 914 | Pfam | LIM-domain binding protein | 349 | 603 | IPR029005 | - | |
Cma09g01067 | 914 | MobiDBLite | consensus disorder prediction | 76 | 90 | - | - | |
Cma09g01067 | 914 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 7 | 914 | IPR029005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02418 | Cma-Chr4:16680622 | Cma09g01067 | Cma-Chr9:5608108 | 0 | dispersed | |
Cma09g01067 | Cma-Chr9:5608108 | Cma15g00631 | Cma-Chr15:2982340 | 0 | dispersed | |
Cma01g01019 | Cma-Chr1:7481980 | Cma09g01067 | Cma-Chr9:5608108 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g01067 | - | - | csv:101221714 | 1376.69 |