Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g01077 | ATGCTTGGTGACTCCACTACTTCCGTCTTGGGCGGTGGCGCCGCCGTACCGGAGACGAATCATTGCCATGATGAGGTAATCGGAGACATGGGTGACGGCGGGGGTGTAGCGGCGGCGGAGGAGATTAATAACAATTCTGGTGAAGAGGAGAGACGGAGAAGCGGAGGAGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACCTTAGCNCTCCTGAAAATTCGCTCCGATATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAGTTTCCAGGAAATTAGGGGAGCTTGGATATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATACCATAAAAGAACAAGAGAAGTTCGTAGTGGGAAACCAGATAGCAAAACTTACAAATTTTTTGAACAATTAGAAGCTCTTGAGAATCACCCACCTTTTAATTTCAATCCACCGCCGCCGCCGCCGCCGCCGTCAACCACCGTCATTCCCACTGTTCNATCCACCACCACCCTACCCCACTTGATGAACATATCCTTCTCTCAACCAAATCCCACAATTCACCTCCCATCTCCTCCTCGTCCCGCTCCGTTCAATAACCTTACCACCTCATCCGTCCCCGTTGGGTTTCTTGAAGCGGATCTCATCTCGAATTCGACGTCAGATGATGTCGATGATTCATCGACATCATCCGAGACACCGAGGAGGAGGACGAAGAAGAGGAAATGGAAGGAGTTTTTTGAGAAATTAATGAAGGAAGTGATTCAAAAACAAGTGGAAATGCAAAAGAGATTCTTGGAAGCTATTGAGAAAAGGGAACAAGAGAGAATTGTTAGAGAAGAAGCTTGGAGAATTCAAGAAATGGCTAAAATCAATAGAGAAAGAGAGATTTTAGCTCATGAAAGATCAATGGCGGCTGCTAAAGACGCCGCCATTACTTCCTTCCTCCAAAAAATAACCGAATCCCAAAACAACAACAGCAACAACAACAACAATTTGTCACGAACGCCACCGCCACCGCCTCCACCACAACAACAACCAATACCCATGTCAAATCCGACACCGGTCGTACAACCGCCACCACCACCGCCACCTTCATCGACATTGCAAGTAGTTCTTCCACAAAAAATGGAGATTATGAAAATGGATCATAATGGTGGGGAGAATTACACTATGAGTCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTAGAAGCATTGATCAAATTAAGAACAAATCTTGAAGCCAAATATCAAGAGAATGTACCAAAAGGGCCATTATGGGAAGAGATATCATCAGCCATGAAGAAAATAGGTTACAATAGAAATGCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAACAAGAAAAACAAGGCCAGAGGATTCCAAGACATGCCCTTATTTTCACCAGCTCGATGCATTGTATAGGGAAAAGGGCGGCGGAAACAACAACAACAACAACAACAGGAAGCTCGAGCTCGAAAACATCGGTTCTTCGACGATGATTCCGTTGATGGTTCAGCCCGAACAACAATGGCCACCGCAGCAAGAGATCACCCGACCAGACTCGGGCAACGAAGAGATGGAAAGCGAACCGATGGATCGCGACGATAAAGATGATGATGATGAAGAGGAAGAGGAAGAGGACGAGGGTGGTGGGAACTATGAGATTGTGGCTAGCAAACCAACTTCGGTGAGTACTGCTGAGTGA | 1782 | 46.13 | MLGDSTTSVLGGGAAVPETNHCHDEVIGDMGDGGGVAAAEEINNNSGEEERRRSGGGDDGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEQVSRKLGELGYHRSAKKCKEKFENVYKYHKRTREVRSGKPDSKTYKFFEQLEALENHPPFNFNPPPPPPPPSTTVIPTVXSTTTLPHLMNISFSQPNPTIHLPSPPRPAPFNNLTTSSVPVGFLEADLISNSTSDDVDDSSTSSETPRRRTKKRKWKEFFEKLMKEVIQKQVEMQKRFLEAIEKREQERIVREEAWRIQEMAKINREREILAHERSMAAAKDAAITSFLQKITESQNNNSNNNNNLSRTPPPPPPPQQQPIPMSNPTPVVQPPPPPPPSSTLQVVLPQKMEIMKMDHNGGENYTMSPASSSSRWPKVEVEALIKLRTNLEAKYQENVPKGPLWEEISSAMKKIGYNRNAKRCKEKWENINKYFKKVKETRKTRPEDSKTCPYFHQLDALYREKGGGNNNNNNNRKLELENIGSSTMIPLMVQPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDDEEEEEEDEGGGNYEIVASKPTSVSTAE | 593 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5686463 | 5688867 | + | CmaCh09G010770.1 | Cma09g01077 | 301082 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g01077 | 593 | ProSiteProfiles | Myb-like domain profile. | 405 | 469 | IPR001005 | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 191 | 213 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 230 | 249 | - | - | |
Cma09g01077 | 593 | ProSiteProfiles | Myb-like domain profile. | 67 | 125 | IPR001005 | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 328 | 345 | - | - | |
Cma09g01077 | 593 | CDD | GT1 | 411 | 476 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 553 | 577 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 503 | 545 | - | - | |
Cma09g01077 | 593 | PANTHER | - | 33 | 588 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
Cma09g01077 | 593 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 33 | 588 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 346 | 381 | - | - | |
Cma09g01077 | 593 | Gene3D | - | 69 | 130 | - | - | |
Cma09g01077 | 593 | Gene3D | - | 413 | 474 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 158 | 174 | - | - | |
Cma09g01077 | 593 | Pfam | Myb/SANT-like DNA-binding domain | 67 | 153 | IPR044822 | - | |
Cma09g01077 | 593 | Pfam | Myb/SANT-like DNA-binding domain | 411 | 498 | IPR044822 | - | |
Cma09g01077 | 593 | SMART | sant | 65 | 127 | IPR001005 | - | |
Cma09g01077 | 593 | SMART | sant | 409 | 471 | IPR001005 | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 328 | 388 | - | - | |
Cma09g01077 | 593 | CDD | GT1 | 67 | 132 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 155 | 177 | - | - | |
Cma09g01077 | 593 | MobiDBLite | consensus disorder prediction | 500 | 593 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01012 | Cma-Chr1:7366076 | Cma09g01077 | Cma-Chr9:5686463 | 0 | dispersed | |
Cma09g01077 | Cma-Chr9:5686463 | Cma02g00969 | Cma-Chr2:5785720 | 7.32E-121 | dispersed | |
Cma09g01077 | Cma-Chr9:5686463 | Cma09g01078 | Cma-Chr9:5703493 | 2.14E-65 | tandem | |
Cma13g00388 | Cma-Chr13:4468626 | Cma09g01077 | Cma-Chr9:5686463 | 6.55E-17 | transposed | |
Cma01g01011 | Cma-Chr1:7341263 | Cma09g01077 | Cma-Chr9:5686463 | 2.47E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
35651 | PF13837 | Myb_DNA-bind_4 | 1.20E-20 | CL0123 | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g01077 | - | - | cmos:111443426 | 843.958 |