Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g01150 ATGATAAAGCAAGCGCACTCATTGATTCAAATTCTCAACGAGCTCCAATTCATCACAACCATTAGCAGACACCCATTCCGTTCATCGATCCATCATTTCTCTCCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGGAATCATCGTCGCCGGTCGCCCATGGCCGCCTCCGCCGCGGGTAACCCTTCACCCTCCTCTTCCTCCTCCTCCAACGCTTTTATTTTCTCCCCCGATTCTCCCCCTAGACTCGTTCTCACACCCCATCAGGTGAAGCTTTGTTCCGAAGCTCTTGACGCCTTCAAGGAGAAGCTCCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCCAGAGAATAACTGCATCGGACATGAAGAAAAATTGCTCTGTGGCTCTTGACAATGTCAACATCAGTAAGAATCGTTACACCGATGTATTACCCTTTGACGAGACTAGAGTCGTACTCGACTCTTGTAAGGATTACAGACCTTCCGCAAAGGGTTATATCAATGCAAGCTTTATTTCCAGTTCCTCCTCAGAAAGCCTTTCTAAGTTTATTGCCACACAAGGTCCATTACCACACACTTATGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTCATTGATAATTACAAGATGGTGAAGTGTGGAGATTATTTTCCAGCTGAAGATGGTAGTAGAGATTTTGGTAATCTATTGGTAGTCTCCAAATGGATAAAATCTTCCAATTCCTCTCTTATACTGCGCCATTTGGAAGTGAACCATAAAGAGTCAGAAGAACATGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCCGACCATGGAGTTCCTAACGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCACCCAATCTCGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACTGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACTTGTCTGCTTTAGATCTTGTCAGTACCATTTTTACGTTTAGGTCCCAGCGAATTGGAATGGTTCAAACTCTGGTAAACTAG 1119 45.13 MIKQAHSLIQILNELQFITTISRHPFRSSIHHFSPFQIRPLGNLTSTRSRNHRRRSPMAASAAGNPSPSSSSSSNAFIFSPDSPPRLVLTPHQVKLCSEALDAFKEKLQMPDVINQEFARLQAQRITASDMKKNCSVALDNVNISKNRYTDVLPFDETRVVLDSCKDYRPSAKGYINASFISSSSSESLSKFIATQGPLPHTYEDFWEMVFQYKCPAILMLTRLIDNYKMVKCGDYFPAEDGSRDFGNLLVVSKWIKSSNSSLILRHLEVNHKESEEHVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPNLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDLSALDLVSTIFTFRSQRIGMVQTLVN 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6592103 6601729 - CmaCh09G011500.1 Cma09g01150 301155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g01150 372 Pfam Protein-tyrosine phosphatase 143 370 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 103 370 IPR029021 -
Cma09g01150 372 SMART PTPc_3 113 372 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 MobiDBLite consensus disorder prediction 41 76 - -
Cma09g01150 372 ProSitePatterns Tyrosine specific protein phosphatases active site. 320 330 IPR016130 GO:0016311|GO:0016791
Cma09g01150 372 PRINTS Protein tyrosine phosphatase signature 279 296 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 PRINTS Protein tyrosine phosphatase signature 350 365 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 PRINTS Protein tyrosine phosphatase signature 174 181 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 PRINTS Protein tyrosine phosphatase signature 192 212 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 PRINTS Protein tyrosine phosphatase signature 317 335 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 299 372 IPR000387 GO:0016311|GO:0016791
Cma09g01150 372 Gene3D Protein tyrosine phosphatase superfamily 87 372 IPR029021 -
Cma09g01150 372 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 60 371 - -
Cma09g01150 372 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 60 371 - -
Cma09g01150 372 SMART ptp_7 280 372 IPR003595 -
Cma09g01150 372 ProSiteProfiles PTP type protein phosphatase domain profile. 114 372 IPR000242 GO:0004725|GO:0006470
Cma09g01150 372 MobiDBLite consensus disorder prediction 62 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g01150 - - bhj:120086129 615.92