Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma09g01282 | ATGGCCGCCTTTCACCAAACCGCCGCCTCACTCCAGGCCAAACTCCTTCCAACAATCCGAATCTCCCGGACCACTCCGGCAAACCTCTCTTTCTCCGCCACTTTTCCTTCTGGAAGACTCCGCCTCGGCCAACACCGCTCTCACGGCGGCGCTAGAATGTCCGCCTCGGCTGCTGGAAGCTACGCTGCGGCGCTGGCCGAAGTCGCTGCGTCTAACAACACGCTGGATGCAACAAGCGGCGATGTCGAGAAGATCGAGAGCGTGTTCGCCGATTCGCAGGTGTTCGATTGCTTCGCGAATCCGACGATTAGCATCGAGAAGAAACTTGCGTTGGTGGATGAGATCGCGGCGTCGTCGTCTCTACTGCCGCATACGGCGAATTTCTTGAAGATCCTAGTGGACGCGAAGAGAATCGATATCGTGAAGGAGATCGTGACGGAGTTCGAATCCGTTTACAACAAAATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCCGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCTAAGAATGTGAGGATCAAGACGCAGATTGATCCGAGTCTGGTTGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTTCTCAGCTTGATCTTGGTAATATTCAACTGGCTGTTTAA | 723 | 52.97 | MAAFHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQHRSHGGARMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDCFANPTISIEKKLALVDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVPLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8822951 | 8823673 | - | CmaCh09G012820.1 | Cma09g01282 | 301287 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma09g01282 | 240 | PRINTS | ATP synthase delta subunit signature | 57 | 76 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | PRINTS | ATP synthase delta subunit signature | 126 | 137 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | PRINTS | ATP synthase delta subunit signature | 137 | 151 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | PRINTS | ATP synthase delta subunit signature | 188 | 203 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | PRINTS | ATP synthase delta subunit signature | 206 | 224 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | Hamap | ATP synthase subunit delta [atpD]. | 53 | 233 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | Gene3D | - | 57 | 149 | IPR026015 | - | |
Cma09g01282 | 240 | TIGRFAM | ATP_synt_delta: ATP synthase F1, delta subunit | 58 | 231 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 190 | 209 | IPR020781 | GO:0015986|GO:0016020|GO:0046933 | |
Cma09g01282 | 240 | PANTHER | BNACNNG66500D PROTEIN | 47 | 239 | - | - | |
Cma09g01282 | 240 | PANTHER | ATP SYNTHASE DELTA CHAIN | 47 | 239 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | Pfam | ATP synthase delta (OSCP) subunit | 58 | 231 | IPR000711 | GO:0015986|GO:0046933 | |
Cma09g01282 | 240 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 55 | 157 | IPR026015 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00931 | Cma09g01282 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma06g00980 | Cma-Chr6:6648594 | Cma09g01282 | Cma-Chr9:8822951 | 3.96E-18 | dispersed | |
Cma09g01282 | Cma-Chr9:8822951 | Cma14g01006 | Cma-Chr14:5295228 | 6.76E-15 | dispersed | |
Cma01g00931 | Cma-Chr1:5787559 | Cma09g01282 | Cma-Chr9:8822951 | 2.47E-137 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma09g01282 | K02113 | - | csv:101211740 | 377.481 |