Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma09g01290 ATGATCTATAGGTCCATTAGGTCTTGTTTTGATTTTGGTTTAAATTTTCCTTCGCCGCTTCGATTGTGCAGTAGTATACAGAGTGCTGTGGCGAAAATGGTTCATGAAGCGGCTGATATGGTAATTGACGGGAACGAACAGAAGCCGAAGAACATTGTTTCTAATGGATTCGATGCGAATTATCTCAAAATTTACTACGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCAGGCAGTGACCATTCTTATGTTGGCCGGAGAGAATTTTCATTCACCTTGGATAATGATATTTATCTACGGTTTCAATCTTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACCCTCCGAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGAGATCATATATAGAAGTTCTCAAGGATAGCTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATACTAGATATGATTCATGATGAATCCATTACCTCGGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGTCACAAGGAATGCGTCGGCACGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGACTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCGATCGACCCTGAACGCTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCATACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAG 1434 40.52 MIYRSIRSCFDFGLNFPSPLRLCSSIQSAVAKMVHEAADMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNPLSW 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8896104 8905909 + CmaCh09G012900.1 Cma09g01290 301295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma09g01290 477 PANTHER DNA PRIMASE SMALL SUBUNIT 68 477 IPR014052 GO:0003896|GO:0006269
Cma09g01290 477 CDD AE_Prim_S 71 406 IPR014052 GO:0003896|GO:0006269
Cma09g01290 477 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 63 415 IPR014052 GO:0003896|GO:0006269
Cma09g01290 477 SUPERFAMILY Prim-pol domain 58 423 - -
Cma09g01290 477 PANTHER DNA PRIMASE 68 477 - -
Cma09g01290 477 Gene3D DNA primase, PRIM domain 49 458 - -
Cma09g01290 477 Pfam DNA primase small subunit 164 397 IPR002755 GO:0003896|GO:0006269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma09g01290 K02684 - csv:101203146 860.907