Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00026 ATGGCTCTGTCGAAAGATGGGCAACGACAACCTCTGGTGCCAAGCTTTGTGTATTCTGCTAATTGGGGGATTTCCCAAACAGTGGTTAGGACAACGCCGGCATGGAGTTACGGCAGGAGCTTCCCAATTGAAGCTCCGAAAGAGAAGATAAAGATGTATTCGCCGCCCTTCTACGCCGCTTGTACAGTAGGCGGCATTTTGAGTTGTGGACTCACCCACATGACTGTCACCCCCCTCGACCTCGTCAAGTGCAATATGCAGATCGACCCTGCAAAGTACAAGAACATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAGAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGGGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATAGTTGGAGCAGAGAATGCAGCCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTAATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGCGTCCAAACGCAACCTGGTTTTGCTCGGGGGTTGTCAGATGGGCTCCCAAAGTTTGTCAAGTCTGAGGGTGTTCTTGGGCTCTATAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCGTATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTAGAGATGCTGTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGTGGATATGTGGCCGGCGTCCTCTGTGCCGTTGTCTCACACCCGGCTGATAATCTCGTCTCTTTTCTCAACAACGCAAAGGGCGCAACCGCCGGGGATGCTGTGAGGCAGCTGGGTTTATGGGGTCTGTTCACTCGAGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACCGGATCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGCCAACAACGGGTGGAGCTGCTCCTTCTCCTGCCGCTAACAAGTGA 1053 50.43 MALSKDGQRQPLVPSFVYSANWGISQTVVRTTPAWSYGRSFPIEAPKEKIKMYSPPFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIVGAENAAKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGAAPSPAANK 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 98679 100854 + CmaCh10G000260.1 Cma10g00026 301342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00026 350 SUPERFAMILY Mitochondrial carrier 58 329 IPR023395 -
Cma10g00026 350 Pfam Mitochondrial carrier protein 59 142 IPR018108 -
Cma10g00026 350 Pfam Mitochondrial carrier protein 154 241 IPR018108 -
Cma10g00026 350 Gene3D Mitochondrial carrier domain 58 334 IPR023395 -
Cma10g00026 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 140 IPR018108 -
Cma10g00026 350 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 349 IPR044677 GO:0005315|GO:1990547
Cma10g00026 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 237 IPR018108 -
Cma10g00026 350 PANTHER PHOSPHATE TRANSPORTER 6 349 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00026 Cma11g00008 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00026 Cma-Chr10:98679 Cma15g00816 Cma-Chr15:4108364 0 dispersed
Cma10g00026 Cma-Chr10:98679 Cma11g01543 Cma-Chr11:10063250 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00026 K15102 - csv:101220423 615.92