Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00068 ATGCAACTCATCTACTTCGCCCTCTTCCTCTTCTTCCTTCTATCACTCTCTTCCACGGCCTTCTTCTGTCTCTATCTTTCCTTCTTTAAATTCTACTGCTTCTCCAAAAACCTCTTTTATTCCCCTCCGTCATACCCTTTCATCGGCTGCTTGATCTCTTTTTACAAAAACCGGCGCCGCCTTCTAAGCTGGTACACCCACCTCCTTTCCCACTCTCCCACTCAGACCATTGTGGTGAATCGCCTTGGTTCGAGGCGGACTGTTGTCACGGCCAACCCCGCCAACGTCGAGCACATGCTCAAGACCAATTTTGTTAACTACCCTAAAGGGAAGCCGTTTACTGATATACTCGGCGATCTCCTCGGCTGTGGCATTTTCAATGTCGACGGCGATTTATGGTCCACCCAACGCAAGCTTGCTAGCCATGAATTTTCCGCTAAGTCCGTTAGGGAATTCGTCGTTAAGACACTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCCAAAACGCTGCTCGAACTAACGCCGTCCTCGATTTGCAAGATGTCTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTGACGGTAGGTACGGATGAGCAGTGCTTGGACATGTCTCGCCCACTACCGGCAATAGTAAATTCATTGGACACGGCAACTGGGATCAGCGCAGGGAGGGCAGTAGCGCCACTTTTTCTCACGTGGAAGGCCAAGCGGATGCTCAACGTCGGCTCCGAAAAGAAGCTCAAAGAAGCGGTGGAAATGGTCCATGAATGGGTCTCCAACATCATTCGTAACAGAAACCTGAACAATAGTAATACGCTTGATCATAACCACACACACGGCGATTTGTTATCTCGCCTCTTGTCGGCCGGCCACAGCCAGGAAGTGGTTAGAGACATGGTCGTCAGCTTCATAATGGCCGGCCGTGACACTACCTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTCACAAAGCACCCCAAAGTCGAACAGGTCATAGTGGACGAAGCCATTAAATTGTCCGGCGATTCCGAAACTGCGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAGGCGTGTTTATGCGAGTCCATGCGGCTATACCCTCCGGTGGCTTGGGATTCGAAGCACGCAGCGGCGCCGGATATTCTGCCGGATGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCTTATGGAATGGGGCGGATGGAGGAGCTGTGGGGGAAGGACCGACTCGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAACCGGTGAGTCCGTTCAAGTTCCCGGTGTTTCAAGCCGGTCCAAGGATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGATGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCGGCGAATGAAAATGCGCCGGTTTTTGTCCCCTTGTTGACAGCTCATATGGCTGGTGGACTGAAGGTTTATGTCGGGGAAAGGAAAGAACAAAAGTCAACCATCTACCGCAGCCCCCAGCCTGTCCATGTTCGTGCTCTCCCCTCGACACTCGGCGATTTTCCCTCACCACCGCGCGACAGCCACCCTCCAGCCGACAGAGACCCACGCGAACGGAGCTTCCAGTGTGTTGTAGCAGCTCTTCAGGCTACTTTCCTCCACTCCACGATTTATCTCCTGCAACTGCGGACTCACGACGCAAGCAACCTGAACGCTGACGATTCCCTTTCTTTTTTCCGGCGAAATCAGCGTGTTGTGACGTTTTCCGGCGGCCCCGACGTGACTCACGCGTTTTCAACAGTGTGCAAGGCCAGGGGATCTGATCTGATCACCGTTTTCACGTCTATGTATGGCTTCTTATAA 1896 51.69 MQLIYFALFLFFLLSLSSTAFFCLYLSFFKFYCFSKNLFYSPPSYPFIGCLISFYKNRRRLLSWYTHLLSHSPTQTIVVNRLGSRRTVVTANPANVEHMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGDLWSTQRKLASHEFSAKSVREFVVKTLEDEVHLRLIPLLQNAARTNAVLDLQDVLGRLAFDTVCKVTVGTDEQCLDMSRPLPAIVNSLDTATGISAGRAVAPLFLTWKAKRMLNVGSEKKLKEAVEMVHEWVSNIIRNRNLNNSNTLDHNHTHGDLLSRLLSAGHSQEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKVEQVIVDEAIKLSGDSETASLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAPDILPDGTPVRKGDRVTYFPYGMGRMEELWGKDRLEFKPDRWFQNGELKPVSPFKFPVFQAGPRMCLGKEMAFIQMKYVMATVLKRFEFRPANENAPVFVPLLTAHMAGGLKVYVGERKEQKSTIYRSPQPVHVRALPSTLGDFPSPPRDSHPPADRDPRERSFQCVVAALQATFLHSTIYLLQLRTHDASNLNADDSLSFFRRNQRVVTFSGGPDVTHAFSTVCKARGSDLITVFTSMYGFL 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 262587 266990 + CmaCh10G000680.1 Cma10g00068 301384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00068 631 PANTHER CYTOCHROME P450 94B3 21 504 - -
Cma10g00068 631 Pfam Cytochrome P450 42 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 SUPERFAMILY Cytochrome P450 30 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 MobiDBLite consensus disorder prediction 526 547 - -
Cma10g00068 631 Gene3D Cytochrome P450 25 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PANTHER CYTOCHROME P450 21 504 - -
Cma10g00068 631 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00068 631 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00068 Cma11g00038 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma06g01121 Cma-Chr6:7546709 Cma10g00068 Cma-Chr10:262587 1.72E-38 dispersed
Cma10g00068 Cma-Chr10:262587 Cma13g00289 Cma-Chr13:2580900 3.68E-141 dispersed
Cma10g00068 Cma-Chr10:262587 Cma11g00038 Cma-Chr11:173319 0 wgd
Cma10g00068 Cma-Chr10:262587 Cma11g01500 Cma-Chr11:9855916 2.44E-38 wgd
Cma10g00068 Cma-Chr10:262587 Cma14g00711 Cma-Chr14:3599654 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00068 K20665 - csv:101202989 819.69