Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00146 ATGTTAGTCTTTTTAGTTTATTGCAATCTTTGCCAATACCATCGCATCGTCCTGTGTCTGTATGTCTTCCGCCCTCCTATGTTGTCGCAGAAAAGAAATCCAGATGATGGAGATGGTCCGTCGGATGGTGACAATCCCGATGATAAGCGTAGAAAGTTCCGTTTCTGGAGTGTGATTCAGGATGCCCCATCATTGCAATCAATGCAACAGCTATTGGAGCCACTCATTCGTAAAGTGGTAAGGGAGGAGGTTGAACTGGCGCTCAGAAAGTACATTACTAGGGTGCAAAGGAATGATGGAAATGACGGTAAAGAAATCTGTTCTTCCGGGTCGAGATGCTTACAATTGAAGTTCGTAACTGGTATGTCTCTCCCGGTATTTACCGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGACGGTGGCTTTGGTTGACACCATAAGTGGGGAAGTTGTTGACACTGGGCCTCAATCCTCAGCCAAAGTGGAAATTGTAGTCCTAGAGGGTGATTTTGAGGGTGGAGGTGATAATTATACTGTGGAGGAGTTTAAGAATAACATTGTAAGAGAGAGGGAAGGAAAGAAACCACTTCTTACAGGAGATACATTTGTGAGTCTCAAATATGGCATTGGTATGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTCGATGCCGTCGGTTTAGGCTGGGTGCAAGAATTATAGACGATAATGTCGGAACAAGAGTACTGGAAGCAAAGACTGCATCGTTTGTGGTCAGGGATCACCGCGGAGAATTGTACAAGAAGCACCACCCTCCATCTCTGGGGGATGAAGTATGGAGATTGCAGAAGATTAGCAAGGATGGAGTCTATCATAAGCGCCTTAGCCAAGAAAAAATCGAGACGGTGCAAGATTTCCTAACTCAGCTTTATGTACAACCTTCAAGACTTCGTAATATTTTTGGCCCTGGTATGTCTACTAAAATGTGGGAAGCTACAATTGAGCATGCACAGACATGTGTGCTCGATAAGAAGATTTACGTATACAAGCCTCGTGATTTGGAACAGAAAAGCGGAGTGGTATTTAATGTTGTAGGGCAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCAAAGATAAGCTATCTGAAGTTGAAAAGGCTGATGCTCACAACCTGGTTATCTCCGCATACGAACACTGGGAAGAAGTCGACTCTATTGACGATGAAAATTCTCTTGTAGATGGCTCTTCTCACCCACTCAGTTTCCTTTACACCCCGAGCTCACCAATGGAGGATCATTCATATGGTAGCAAGTACTTAGCTTCTCCAAAATTTAGTGGTTTTGATTTTACACCATCAAATGCATACACTTCTGAAATAATTTCATCGATGGGTTCTATTGGGAATTCGAGTGGCTTGGACGATCATGCTTTGCAGGGTTTTGATTCTATGGTTGTAAGATATGATCAGATGCCAAGTTCCCCAAACTTTGCCAACTCTTCTCTGATCTGTGATTCTGAGCCACTAAACTCATCTTTCTTTGATGTGGATCATCTGCAAGTTCTAGAGTCTGATTTCCAATGTAGCTCGATTTTCGAATCACGTTCTACTCTTCAAGGTGGCTCCTCATCATGTGGTGCTCAAAGGAGATGGACTAAAGTATATGGTGTGCTAAAGTGGTACTTTTTGTTGAGATTTGTAATTAGGCGAAACAAAAGCGTATCCGAGAGATACAAAGGTGCTGTACAGGGTCATGGAAAGGAAAAATTCGACTATGGTTGA 1779 43.17 MLVFLVYCNLCQYHRIVLCLYVFRPPMLSQKRNPDDGDGPSDGDNPDDKRRKFRFWSVIQDAPSLQSMQQLLEPLIRKVVREEVELALRKYITRVQRNDGNDGKEICSSGSRCLQLKFVTGMSLPVFTGARIEGRDGSNLTVALVDTISGEVVDTGPQSSAKVEIVVLEGDFEGGGDNYTVEEFKNNIVREREGKKPLLTGDTFVSLKYGIGMVGEISFTDNSSWTRCRRFRLGARIIDDNVGTRVLEAKTASFVVRDHRGELYKKHHPPSLGDEVWRLQKISKDGVYHKRLSQEKIETVQDFLTQLYVQPSRLRNIFGPGMSTKMWEATIEHAQTCVLDKKIYVYKPRDLEQKSGVVFNVVGQVMGLLSDYQYVPKDKLSEVEKADAHNLVISAYEHWEEVDSIDDENSLVDGSSHPLSFLYTPSSPMEDHSYGSKYLASPKFSGFDFTPSNAYTSEIISSMGSIGNSSGLDDHALQGFDSMVVRYDQMPSSPNFANSSLICDSEPLNSSFFDVDHLQVLESDFQCSSIFESRSTLQGGSSSCGAQRRWTKVYGVLKWYFLLRFVIRRNKSVSERYKGAVQGHGKEKFDYG 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 663476 669529 - CmaCh10G001460.1 Cma10g00146 301462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00146 592 PANTHER OS02G0177800 PROTEIN 30 569 IPR012416 GO:0005516
Cma10g00146 592 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
Cma10g00146 592 PANTHER CALMODULIN-BINDING PROTEIN 60 A 30 569 - -
Cma10g00146 592 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
Cma10g00146 592 Pfam Calmodulin binding protein C-terminal domain 342 403 IPR046829 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00146 Cma11g00114 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00146 Cma-Chr10:663476 Cma11g00408 Cma-Chr11:1994432 8.68E-106 dispersed
Cma10g00146 Cma-Chr10:663476 Cma11g00114 Cma-Chr11:614142 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00146 - - csv:101211405 984.171