Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g00148 | ATGGACTTCTTTCCTCTTGCCGCTTTCCTTTGTGTAATTTTGCTCTCTGCTTCCTTCTCTGTTCGATCAGAGCTTTCTCTCGATTATTACCAGAAGACTTGCCCCGATTTTGAGAGAATCGTTCACGAGGCCGTCGTTCACAAGCAAACTGCTAGTCCAATCACCGCTGCCGCTACTATGCGCCTCTTCTTTAACGATTGTTTGGTTGGAGGTTGCGATGCTTCTGTTCTCATCTCCTCTAATGTCTTCAACCACGCCGAGCGCGAAGCCGAAATCAACCTCTCTCTTCCAGGAGACGCCTTCGACGTCGTCACTCGAGCGAAGATTACCTTGGAGCTTTCCTGCCCCGGGATCGTCTCTTGCTCCGACGTACTAGCACAGGCGACTCGTGATCTCATCGCCGTCACAGGCGGACCGTCGTATGGCGTTCAATTAGGGCGCGAAGACAGTCACGTCTCGAAATCTTCAGACGTGGAAGGAAACATTCCGATTGCAAACCAAACAGTCGACAAGATGATCAAGCTATTCACAGGGAAAGGCTTCACGATTCAGGAAATGGTAGCGCTGTACGGCGGACGCACAATCGGATACTCAAATTGCAGGGAATTTGGCGACCGGCTCTTCAAGTTCAGCAAGACAACACCAACCGATCCAGAGCTTCATCCGAAGTTGGCGGAGGCTTTGAAAACGACTTGCACGGATTACGAGAAGAATCCTGGATTGTCGGCATACAGCGACGTCGTAACGCCGTTGAAGTTCGACAACCAATACTACCGGAACCTGCTGAGAGGTATGGCGCTTTCGAAGTCAGAACATGCATTGGCAAAGGATCCAAGGACGAAGAAGTTTGTGGAGATGTACGCGGGAAATCAGGACCTGTTCTTCAAGGACTTTGCAAAAGCTATGGAGAAGATGAGCGTTCGCGAGGTGAAAACTGGCGGGAAAGGAGAAGTGAGGAGGAGATGTGATGTGTTCAATTCAATCCGCACTCAGAAAATATAA | 1002 | 50.0 | MDFFPLAAFLCVILLSASFSVRSELSLDYYQKTCPDFERIVHEAVVHKQTASPITAAATMRLFFNDCLVGGCDASVLISSNVFNHAEREAEINLSLPGDAFDVVTRAKITLELSCPGIVSCSDVLAQATRDLIAVTGGPSYGVQLGREDSHVSKSSDVEGNIPIANQTVDKMIKLFTGKGFTIQEMVALYGGRTIGYSNCREFGDRLFKFSKTTPTDPELHPKLAEALKTTCTDYEKNPGLSAYSDVVTPLKFDNQYYRNLLRGMALSKSEHALAKDPRTKKFVEMYAGNQDLFFKDFAKAMEKMSVREVKTGGKGEVRRRCDVFNSIRTQKI | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 676861 | 677862 | + | CmaCh10G001480.1 | Cma10g00148 | 301464 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g00148 | 333 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 326 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 326 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PANTHER | PEROXIDASE 41 | 8 | 329 | - | - | |
Cma10g00148 | 333 | Pfam | Peroxidase | 51 | 289 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | Gene3D | Peroxidase, domain 2 | 163 | 305 | - | - | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 184 | 196 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | Gene3D | - | 28 | 326 | - | - | |
Cma10g00148 | 333 | PANTHER | - | 8 | 329 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma10g00148 | 333 | CDD | secretory_peroxidase | 24 | 325 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00148 | Cma-Chr10:676861 | Cma11g01116 | Cma-Chr11:6277923 | 0 | dispersed | |
Cma11g01161 | Cma-Chr11:6725930 | Cma10g00148 | Cma-Chr10:676861 | 0 | transposed | |
Cma10g00148 | Cma-Chr10:676861 | Cma11g00115 | Cma-Chr11:619576 | 1.24E-164 | wgd | |
Cma10g00148 | Cma-Chr10:676861 | Cma13g00904 | Cma-Chr13:7246240 | 5.61E-152 | wgd | |
Cma10g00148 | Cma-Chr10:676861 | Cma14g00629 | Cma-Chr14:3113042 | 3.38E-130 | wgd | |
Cma10g00148 | Cma-Chr10:676861 | Cma18g00148 | Cma-Chr18:760016 | 2.83E-156 | wgd | |
Cma10g00148 | Cma-Chr10:676861 | Cma04g02725 | Cma-Chr4:18364076 | 2.08E-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g00148 | K00430 | - | csv:101213178 | 521.931 |