Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00161 ATGGAGCTTCAGAACACAGTGAAGGAAGCCCTAAACGCACTGTACCATCACCCTGACGATGCCTTCCGTATGCAGGCCGATCGGTGGCTTCAAGACTTCCAGCGCACTCTTGATGCCTGGCAGGTTGCTGATAATTTGCTTCATGAACCCACCAGCAATTTGGAAACTTTGATCTTTTGCTCTCAAACACTACGAAGCAAGGTACAGAGAGATTTTGAAGAACTGCCTTCAGAAGCTTTTAGGCCCTTGCGTGACTCATTAAATAATTTATTAAGAAAATTTCACAAGGGCCCACCTAAAGTCCGAACTCAGATTAGCATAGCAGTGGCTGCATTAGCAGTACATGTTCCTGCTGATGATTGGGGAGAAGGTGGTATTGTAAATTGGCTCAGGAATGAGATGAACTCACATCCAGAGTATGTACCAGGATTTTTGGAGCTACTGACAGTTTTGCCCGAGGAAGTTTACAATTACAAGATCGCAGCTCGCCCGGATAGACGCCGTCAATTTGAAAAGGAACTCACATCCCAAATGGAAGTTACCCTTAATATCTTGACAGCTTGTTTGAATATTAATGAGCTGAAGGAGCAGGTGCTCGAGGCATTTGCTTCTTGGCTTCGATTAAAGCATGGGATCCCAGGATCTTTGCTTGCATCACATCCGTTAGTACTCACAGCTCTTGCAAGTTTAAATTCCGAGCTTCTCTCAGAGGCATCTGTAAACGTTATTTCTGAACTGATACACTATTCAGCAGCTGGAAGCTTAAGTGACCTCCCAGTGCACATGCCCTTAATTCAAGTAATTGTCCCTCAAGTTATGAATTTGAAGGCACAACTTAGAGATTCTTCAAAGGATGAAGAAGATGTGAAGGCCATTGCTCGGTTATTTGCTGACATGGGTGATTCATATGTTGAATTGATTGCAACTGGTTCTGATGAATCGATGTTAATAGTCCATGCCCTACTAGAAGTTACTTCACACCCTGAATACGACATTGCCTCCATGACCTTTAACTTTTGGCATAGCCTTCAGTTGAACTTGACCAAAAGGGATGCATATATTTCTTTTGGCAATGATGCTTCCGTTGAGGCTGAGAGGAAAAGGAGGTTACAAATATTTTGTCCAGTTTATGAATCACTCGTGTCCTTGGTTAGTTTCAGAGTCCAATACCCAAATGACTATCAAGACCTTTCTTATGAGGACCTCAAGGAGTTCAAGCAGACTAGATACGCTGTTGCAGATGTCTTAATTGATGCAGCATTGGTTTTAGGAGGTGATATGTCTCTAAAACTTCTTTACGTGAAGCTTGTGGAGGCTGTTTCAAGCTGTGGAAATAGCACACAAAGTGAATGGCGTCCAGCAGAGGCTGCTTTGTTTTGCATCCAAGCTATATCAAATTACGTTTCAGTTGGTGAGGCCGAAATAATGCCCCAGGTCATGGGTTTACTTCCAAAACTTCTAAAGCAAGCCCAACTACTTCAGACAGTGTGCTACACTGTTGGAGCATACTCGAAGTGGCTTGATGCATCACCGAGTGGGCAGTCTATACTACCTTCAGTAATTGATATCCTCATGAATGGAATGAGCACATCCGAGGATTCTGCAGCTGCTGCAGCCCTAGCATTTAGACATATTTGTGCTGATTGCCGGAGAAAGCTTTGTGGTTTTTTGGATGGTCTCTTTCATATATATAATATGACGGTCAATGGAGAAAGTAGTTTGAAGGTGACTGCTGAGGACTCATTGCACCTAGTGGAAGCATTAAGCATGGTTATCACTGAACTTGTGCCCGATCAAGCTAAGAGAGCACTGGAGGCATTGTGCTTGCCTGTTGTCGCTCCTCTGCAGGAAATTGTCAATCAAGGCCTTGAAGTATTGAATAAGAAGCCTTCTAATGAGTTGACAGTCCATATTGATCGGTTTGCTTACATATTCAGATATGTAAATCACCCGGAAGCGGTTGCAGATGCAATACAGAGGCTTTGGCCACTTTTTAAAGCCATCTTTGACATCCGTGCTTGGGACATGCGGACAATGGAATCTCTTTGCCGATCGTGCAAATATGCTGTGAGAACTTCCGGTAGATTTATGGGAATAACAATTGGAGCGATGTTGGAAGAAATTCAAGGTCTATATAAGCAACACCATCAGCCTTGCTTTCTTTATCTGTCTAGTGAAGTTATAAAGATTTTTGGTTCTGACCCATCTTGCGCAAGCTATCTCCAAAATTTGATTGAAGCACTTTTCATGCACACAACTCGTCTTCTCACAAATATTCAGGAATTTACTGTGAGGCCGGATATTGCCGATGACTGCTTTCTTCTAGCTTCAAGATGCATACGCTATTGCCCTCAACTATTTATTCCATCTTCAGTATTTCCAGCATTAATAGACTGTTCAATGATCGGAATCACAGTACAGCACAGGGAAGCTTCAAATTCAATATTAACCTTCTTGGCTGATGTTTTTGATCTTGCAACTTCAAGCAAAAGTGAACAGTATATATCTAGAAGGGATGCAATTATTATACCTCGAGGTCCCGTTCTCCTTCGAATTTTGATTGCAGCCTTGACGGGGGCACTGCCAAGTTCTCGATTAGAGCCGGTGACATACACGCTATTAGCGTTAACTCGAGCTTATAGAGCACAAGCGTTAGAATGGGCCAAGGAAAGTGTCTCATTGATTCCAGCAACGGCTGTTACTGAAAAAGAGCGGTCGAGATTTTTAAAAGCGTTATCTGATGCAGCCTCAGGGTGCGACATAAATACACTTGCTGTACCAATAGAAGAGCTATCAGACGTATGTCGACGAAATAGGAACGTTCAGGAGATAGTTCAAGGAGCTTTGAGGCCTCTTGAACTGAATGTACGGCCTTTTGCTGCCTTGAGGTGTAATGCCGGTTGGTTTTATTCTTTTCTTCATCTCCATCTTCTCTTTTTACCCTTATTTTTCATTTGGTGTATCAATTACCAATTCCCTTCGTTTCTCTCCCTCCTAATTGCATCTCTTTCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTCCGAGCCTGCACTCTAATTCTGTTCCAGTTTCAATCTTCCCCCGCGCTCGCTTTTTCGATTTCCCCGCCCAGAAGAAATTCACGGCTGGCTTTGCAAATTTGTCGATCTTATTCGCCTTCAAGGGTTCCATTCCTCGATCGGATTCTCTAGCCACAATGGTGTCCGCATCGAACCGTCACAAAAACATGCACTCCCTTCTTGTGGCCAGTCTCACGAAGCTAACCATCCCTTCTTCGTCTCCTTCTTCTTCTCCTCCTCCTCCTTCATCCACAGCCGACTTCGATTTCTCCGACGTATTTGGCCCCACAAATCCCTCCTCGTCATGTTTTCCGGCGGACCCACAACACCACGAACAACAACCAGAGGTCATTCACAACAGATCTCACTCATTTGTGGGTCCATCTCCCCGGTTAACTCCTCCGTCTTCCTTTCCATTTTTCCGAGAAGTCGATCCACAGAGCGAGGAGGAGGAAGAGGAAGAGGAAGAAGATGACCTAGAAATCTCGATTCGCAATGGAGCTCAAGAGGAGATGAAGGAGGCGGATGAGAGTGAAAGTGGTGGTGGAGAGAAGACACAGGGGAAGATTGGAGTTGCGGATTTTGATATTCTTCGAGTGGTGGGAAAAGGGGCGTTTGGGAAGGTATTTTTGGTGAGGAAGAAAGGGGATTGTAAAGGAAACGGCTCTAATAATGATGGGATTTATGCTATGAAAGTGATGAGGAAGGATACCATCATAAAGAAGAATCATGTGGACTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTGCTCATCCTTTCATTGTTCAGCTCCGCTACTCTTTCCAGACCAAATCAAAACTGTACTTGATTCTTGATTTCATAAATGGAGGGCATCTCTTTTTCCATCTGTACAGGCAGGGAATCTTCAGTGAGGATCAGGCAAGGATCTATGCAGCCGAGATCGTTTCGGCCGTTTCGCATCTTCATAGCTGTGGCATTGTGCACCGTGATCTCAAGCCTGAGAACATTCTTATGGATGCTGATGGGCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATCGAGATATCGAGTCGGTCTAATTCGATGTGTGGAACAACAGAGTATATGGCTCCAGAGATCTTGCTTTCTAAAGGTCACAACAAAGATGCTGATTGGTGGAGCGTTGGAGTCCTCTTGTATGAAATGCTTAGTGGCCAGCCACCGTTCACGCACGCTAATAGAAAGAAGCTTCAAGAAAGAATAATCAAAGAGAAAGTGAAGCTTCCACCATACCTGAGCACAGAAGCTCACTCTCTCCTCAGAGGGCTGTTACAAAAAGAGCCTTCTACACGATTAGGCAGCGGACCCAATGGAGGGGACGAGATAAAAAAACACAAATGGTTTCGACCTGTGAACTGGAAGAAACTGGAAAGTAGGGAGCTGCAACCAAAGTTCAAACCGGATGTCAATGGAAATGACTGCACAGCAAATTTCGATCATTGTTGGACAGCAATGCCTCCAGACGACTCACCAGCTCCGACGCCAACCGATGGTGGACACTTCCAGGGATATTCAATGATGCTGACCATGGAGTTCTCTCACTATACTGGCAAATGCAATTGTACATCAGTACACTATACTGCCATTAAATTATTGCTCATTCCACAGCTCAGTGACTTGCAATCCTTCAGATACTTTCAAATGTGTGTGTTGTTGAAATCTGGCTTCTAG 4776 44.18 MELQNTVKEALNALYHHPDDAFRMQADRWLQDFQRTLDAWQVADNLLHEPTSNLETLIFCSQTLRSKVQRDFEELPSEAFRPLRDSLNNLLRKFHKGPPKVRTQISIAVAALAVHVPADDWGEGGIVNWLRNEMNSHPEYVPGFLELLTVLPEEVYNYKIAARPDRRRQFEKELTSQMEVTLNILTACLNINELKEQVLEAFASWLRLKHGIPGSLLASHPLVLTALASLNSELLSEASVNVISELIHYSAAGSLSDLPVHMPLIQVIVPQVMNLKAQLRDSSKDEEDVKAIARLFADMGDSYVELIATGSDESMLIVHALLEVTSHPEYDIASMTFNFWHSLQLNLTKRDAYISFGNDASVEAERKRRLQIFCPVYESLVSLVSFRVQYPNDYQDLSYEDLKEFKQTRYAVADVLIDAALVLGGDMSLKLLYVKLVEAVSSCGNSTQSEWRPAEAALFCIQAISNYVSVGEAEIMPQVMGLLPKLLKQAQLLQTVCYTVGAYSKWLDASPSGQSILPSVIDILMNGMSTSEDSAAAAALAFRHICADCRRKLCGFLDGLFHIYNMTVNGESSLKVTAEDSLHLVEALSMVITELVPDQAKRALEALCLPVVAPLQEIVNQGLEVLNKKPSNELTVHIDRFAYIFRYVNHPEAVADAIQRLWPLFKAIFDIRAWDMRTMESLCRSCKYAVRTSGRFMGITIGAMLEEIQGLYKQHHQPCFLYLSSEVIKIFGSDPSCASYLQNLIEALFMHTTRLLTNIQEFTVRPDIADDCFLLASRCIRYCPQLFIPSSVFPALIDCSMIGITVQHREASNSILTFLADVFDLATSSKSEQYISRRDAIIIPRGPVLLRILIAALTGALPSSRLEPVTYTLLALTRAYRAQALEWAKESVSLIPATAVTEKERSRFLKALSDAASGCDINTLAVPIEELSDVCRRNRNVQEIVQGALRPLELNVRPFAALRCNAGWFYSFLHLHLLFLPLFFIWCINYQFPSFLSLLIASLSSSSSSSSSSSSSSSPSLHSNSVPVSIFPRARFFDFPAQKKFTAGFANLSILFAFKGSIPRSDSLATMVSASNRHKNMHSLLVASLTKLTIPSSSPSSSPPPPSSTADFDFSDVFGPTNPSSSCFPADPQHHEQQPEVIHNRSHSFVGPSPRLTPPSSFPFFREVDPQSEEEEEEEEEDDLEISIRNGAQEEMKEADESESGGGEKTQGKIGVADFDILRVVGKGAFGKVFLVRKKGDCKGNGSNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYAAEIVSAVSHLHSCGIVHRDLKPENILMDADGHVVLTDFGLAKEIEISSRSNSMCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPYLSTEAHSLLRGLLQKEPSTRLGSGPNGGDEIKKHKWFRPVNWKKLESRELQPKFKPDVNGNDCTANFDHCWTAMPPDDSPAPTPTDGGHFQGYSMMLTMEFSHYTGKCNCTSVHYTAIKLLLIPQLSDLQSFRYFQMCVLLKSGF 1591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 728494 747140 - CmaCh10G001610.1 Cma10g00161 301477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00161 1591 Gene3D Phosphorylase Kinase; domain 1 1217 1525 - -
Cma10g00161 1591 Pfam Exportin 1-like protein 98 243 IPR013598 -
Cma10g00161 1591 ProSitePatterns Protein kinases ATP-binding region signature. 1225 1256 IPR017441 GO:0005524
Cma10g00161 1591 Gene3D Transferase(Phosphotransferase) domain 1 1307 1502 - -
Cma10g00161 1591 PANTHER TRANSPORTIN MOS14 3 956 - -
Cma10g00161 1591 ProSiteProfiles Protein kinase domain profile. 1219 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00161 1591 Pfam Protein kinase domain 1220 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00161 1591 MobiDBLite consensus disorder prediction 1170 1185 - -
Cma10g00161 1591 SMART serkin_6 1219 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00161 1591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1346 1358 IPR008271 GO:0004672|GO:0006468
Cma10g00161 1591 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 3 956 - -
Cma10g00161 1591 SUPERFAMILY Protein kinase-like (PK-like) 1218 1546 IPR011009 -
Cma10g00161 1591 Gene3D - 2 931 IPR011989 -
Cma10g00161 1591 CDD STKc_AGC 1225 1483 IPR045270 GO:0004674|GO:0005524
Cma10g00161 1591 SUPERFAMILY ARM repeat 1 1183 IPR016024 -
Cma10g00161 1591 MobiDBLite consensus disorder prediction 1094 1188 - -
Cma10g00161 1591 MobiDBLite consensus disorder prediction 1114 1132 - -
Cma10g00161 1591 ProSiteProfiles AGC-kinase C-terminal domain profile. 1484 1551 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cma10g00161 1591 SMART pkinase_C_6 1484 1543 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00161 Cma-Chr10:728494 Cma01g00745 Cma-Chr1:3970817 8.13E-63 dispersed
Cma14g00786 Cma-Chr14:3929800 Cma10g00161 Cma-Chr10:728494 1.35E-33 dispersed
Cma11g00178 Cma-Chr11:931023 Cma10g00161 Cma-Chr10:728494 0 transposed
Cma10g00161 Cma-Chr10:728494 Cma11g00177 Cma-Chr11:916506 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68823 PF00069 Pkinase 5.70E-70 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00161 K15436 - csv:101215103 1784.23