Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00411 ATGCAGAGGAGGTATCCGGAGAGGACGAACTCCATGAGGGAGAAAAGGAGCTTGGAGGGCGGAGAAGATGAGCTGCCAGAGCGAAAGCGACCAGCTCTAGCTAGTGTCATTGTAGAAGCCCTGAAGGTGGATAGTTTACAAAAGCTCTGCTCATCATTGGAACCAATTCTCCGTAGAGTGGTTAGTGAGGAAGTGGAACGTGCTTTGGCTAAGATAGGTCCTGCTAGAGTTACTGGAAGGTCTTCTCCTAAAAGGATTGAAGGTCCTGATGGAAGAAACTTGCAACTGCACTTTAGGACTAGATTGTCTCTTCCCTTATTCACTGGAGGGAAAGTGGAAGGTGAACAGGGTGCAACAATCCATGTCGTTCTGGTTGATGCCAACACAGGCCAATTAGTAACGTCTGGTCAGGAAGCCTTGTCTAAATTGGACATTGTGGTACTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACGGAGGAAGAATTTGAAAGCCATGTGGTTAAAGAGCGTGAAGGTAAGAGGCCTCTGTTGACTGGTGACTTGCAGGTTACCCTCAAGGAAGGTGTTGGAACACTAGGGGATCTGACCTTCACTGATAATTCAAGTTGGATTAGGAGCAGAAAGTTCAGACTTGGATTAAAGGTGGCTTCAGGATTTTGTGAAGGTGTACGTATTCGTGAAGCCAAAACTGAAGCTTTTACAGTTAAAGATCACCGAGGAGAACTGTATAAAAAACATTACCCACCTGCATTAAATGATGAGGTGTGGAGATTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAGCGGCTAAACAAAAATCAAATATTCTCAGTTGAAGATTTTCTCCGAATGGTGGTTCGAGATTCTCAAAAGCTACGGAGCATCCTTGGAAGTGGTATGTCAAATAAGATGTGGGATGCTCTCCTGGAACATGCTAAGACCTGTGTCCTGGGCGGGAAGCTGTATATTTATTATCCAGAGGAAACAAGAAATGTTGGTGTTGTTTTTAACAATATCTATGAGCTCAATGGACTGATTACAGGGGAACAATACTTTTCTGCTGATTCTCTGTCTGATAGCCAGAAGGTTTATGTAGATACACTAGTGAACAAAGCATATGAAAATTGGAATCAAGTTGTAGAGTACGATGGCAAGTCACTTTTGAGCTCTAAGCAGTCTAAGAAGTCGAATGCATCCCGAAATGACCTTCAAGGCGGTCACCTTGATCTTTCTAATACTCTAGATCATGGGTCAATCCCCCGCATGCCATTGTCAGTTCAGCCTCAGCAGCCTGTAATGGATTCAGGACTCTCGGTTGCAGGGTATGATGATAATGCCGCAAGATATTCAACCCAGCCTCAGTTTGTGAATTCAACTTCTCGACCACAGTTTGACAACTCTCAATATACTTCTAATGAGTTGATTGGCAATTCTAACCAAGTTCATATCTCAAGAAATGACAGTAATGCTTTTGGTTTGGCTCTTGCTCCTCCGCAAGCATCATCTTCAGGGTTCCAGATGCTTGGTTCTTCTATTCAGGAAACTAATCTGAATCCATTTGAATGGTCGAACAATAGAGACAAGGGAGCTGACGACTTCTTTTCAGAGGACGAGATTCGTATGAGAAGTCATGAACTGCTTGAAAATGAAGATATGCAACATTTGCTGCGAATGTTTAGCATGGGAGGGCATGCATCTGGTAACGTCAATGATGAGGGTTTTTCATTCCCATCATTCATGCCTTCACCAATGCCAAATTTCGACGATCGCAGCCGTTCTGGAAAAGCTGTGGTGGGTTGGCTGAAGATCAAAGCTGCAATGAGGTGGGGCTTTTTCATCAGGAAGAAAGCAGCTGAGAGACGCGCACAGCTTGTCGAGCTAGATGAGGAATAG 1905 43.88 MQRRYPERTNSMREKRSLEGGEDELPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKIGPARVTGRSSPKRIEGPDGRNLQLHFRTRLSLPLFTGGKVEGEQGATIHVVLVDANTGQLVTSGQEALSKLDIVVLEGDFNNEDDEDWTEEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLKVASGFCEGVRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKNQIFSVEDFLRMVVRDSQKLRSILGSGMSNKMWDALLEHAKTCVLGGKLYIYYPEETRNVGVVFNNIYELNGLITGEQYFSADSLSDSQKVYVDTLVNKAYENWNQVVEYDGKSLLSSKQSKKSNASRNDLQGGHLDLSNTLDHGSIPRMPLSVQPQQPVMDSGLSVAGYDDNAARYSTQPQFVNSTSRPQFDNSQYTSNELIGNSNQVHISRNDSNAFGLALAPPQASSSGFQMLGSSIQETNLNPFEWSNNRDKGADDFFSEDEIRMRSHELLENEDMQHLLRMFSMGGHASGNVNDEGFSFPSFMPSPMPNFDDRSRSGKAVVGWLKIKAAMRWGFFIRKKAAERRAQLVELDEE 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1886214 1892556 - CmaCh10G004110.1 Cma10g00411 301727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00411 634 PANTHER CALMODULIN-BINDING PROTEIN 60 B 10 632 - -
Cma10g00411 634 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Cma10g00411 634 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cma10g00411 634 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cma10g00411 634 MobiDBLite consensus disorder prediction 394 412 - -
Cma10g00411 634 MobiDBLite consensus disorder prediction 394 424 - -
Cma10g00411 634 PANTHER OS02G0177800 PROTEIN 10 632 IPR012416 GO:0005516
Cma10g00411 634 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00411 Cma11g00408 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00411 Cma-Chr10:1886214 Cma11g00114 Cma-Chr11:614142 1.76E-106 dispersed
Cma10g00411 Cma-Chr10:1886214 Cma11g00408 Cma-Chr11:1994432 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00411 - - cmo:103494282 1153.66