Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00511 ATGGGCGTCGTCACCATTCTTCCAGATCTCGGCACTCAGATTTTCATCCCGGTCTGTGCTGTAGTAGGAATAGTCTTCTCTTTGGTGCAGTGGTACTATGTCTCTCAGGTTAAGCTGTCGCCTAGTCGAGATTCCACTCATAATAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATCGAGGAGGAAGAAGGAGTCAACGACCATAACGTTGTTATTAAGTGTGCCGAAATTCAGAATGCTATCTCTGAGGGGGCAACCTCCTTCCTGTTCACGGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTGTTCCTTGGCTCAGTGGAGGGTTTTAGTACTGAGCCTCAAGCGTGCACTTATGACAAAACAAAGATTTGCAAGCCCGCTTTGGCGACGGCTATATTCAGCACTATATCATTTTTACTTGGTGCAGTTACTTCAGTGGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACGTCTTCAAGTTGTACTATGGCGAAGATTGGGGTGGCCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCGATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGATCTTGTGGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTGGGTGACAATGTTGGGGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCCTATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCTTCTTTTGGCAACAACCATGAGCTGACACCAATGCTCTATCCACTCATAGTTAGTTCTGTGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCTACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCCATTGTTACTTGGCTAGCTGTTCCATCAACATTCACCATTTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGAAACTTTTCTTGTGCGTTTCTGTCGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTACTATACTAGCAATGCGTACAGCCCTGTGCAGGATGTTGCTGATTCCTGCCGAACCGGAGCTGCTACCAATGTTATTTTTGGCTTGGCTTTGGGATACAAATCTGTCATTATCCCCATTTTTGCAATTGCAGTTAGCATTTTTGTTAGTTTCACCTTTGCTGCAATGTACGGCATTGCTGTTGCTGCTCTTGGAATGTTGAGTACAATAGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACTGATGCCCTTGATGCTGCAGGAAACACGACTGCAGCTATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGTGCCTTCGTCAGCCGTGCTGGTGTCACTTCTGTTGATGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTAGGTGCTATGCTGCCGTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCGCTAAAGATGGTCGAGGAGGTGCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGCACTGCTAAGCCCGACTACGCTACATGTGTCAAGATCTCAACCGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACACCCCTAATTGTTGGTATCCTATTCGGGGTTGAAACTCTTTCTGGTGTCCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATCGCCATCTCTGCATCCAACACTGGAGGTGCCTGGGATAACGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGCGACACGATCGGAGACCCGCTCAAGGATACATCCGGACCTTCTCTCAACATTCTCATCAAGCTGATGGCTGTGGAGTCCCTTGTGTTTGCTCCTTTCTTTGCCACTCACGGTGGGCTTCTCTTCAAGCTCTAG 2307 46.77 MGVVTILPDLGTQIFIPVCAVVGIVFSLVQWYYVSQVKLSPSRDSTHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVEGFSTEPQACTYDKTKICKPALATAIFSTISFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINVFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSVGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSTFTIFNFGTQKVVQNWKLFLCVSVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKL 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2323176 2327278 - CmaCh10G005110.1 Cma10g00511 301827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00511 768 Pfam Inorganic H+ pyrophosphatase 25 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma10g00511 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 4 768 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma10g00511 768 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma10g00511 768 PIRSF H+-PPtase 11 767 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma10g00511 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 10 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cma10g00511 768 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 4 768 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00511 Cma11g00511 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00511 Cma-Chr10:2323176 Cma12g01035 Cma-Chr12:8211478 0 dispersed
Cma10g00511 Cma-Chr10:2323176 Cma11g00511 Cma-Chr11:2413130 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00511 K23025 - csv:101222673 1422.91