Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00573 ATGAAGGAGGAGTTGGAATCAGCGGTGGAGGTGCCATTTGGGGTGGCGGCGGCGGCGGTAGTGGCGGCGGCGGTGGTGATTTTGGGTGCAAAAATGGGGTTGGTGTTATGGTGGAAGCCAAGAAGAATGGAGAACCACTTTCTCCGGCAAGGAATTGGAGGGCCTCGGTATCGTTTCTTTATTGGTAATTTCAAAGAACTGGTTTCCATGATGGCGGCGGCTTCTTCCCATCCAATGCCCAAGTTCTCTCATAATATTCTGCCACGTGTCCTCTCCTTCTACCATCACTGGAAGAAGATTTATGGCTCTACGTTTCTGATCTGGTTTGGACCCATTGCTCGAGTGGCGGTGTCTGACCCCGACATGATCCGAGAAATCTTCATCACTAACTCCCATTTGTACGAGAAAAACGAAGCTCATCCGCTCGTTAAACAGCTCGAAGGCGACGGTCTCCTCACTCTCAATGGCCCGAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACTCGGACAATATCAAATTGTTGATTCCCTTGATAGAAGAAATCATAGTGGAAATGGTACAGAAATGGTCGTCCATGGCAGAGGAAACGACCTTGGGTGGGGTGGAGATTGATGTTTTCGATAGCTTCCAAACACTAACTGAAGATGTCATAACGAAAACAGCGTTCGGTTGTAGCTATGAAGATGGTAAAGCGATTTTCAAGCTTCAAACTCAACAAATGATATTAGCTTCAGAAGCTTTTCAAAAGGTCTTCATTCCTGGCTATAGATTCTTACCGACAAGAACAAATATGAAGTCGTGGAAATTAGAGAAGGAAATAAAGAAATCATTGATTAAACTAATCGAGGGGCGAAAACGGAATTTTGAAAAGAATTGGGCAATTAATGAAAAAGGACCAAAAGATTTGTTGGGGCTCATGATCCAAGCTTCCATTTCTGTCCATGACATCGTGGAAGAATGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCTATGCATCCACAGTGGCAAATTCTGGCACGTCATGAGGTCTTTACCATCTGCGGTCCACGTGCCCTCCCCTCCCCTGATGACGTTTCCAAGTTCAAAATTCTGAGCATGATACTAAATGAATCCTTACGATTGTACCCACCCACCGTGGCTACAATCAGACGTGCAAACGCTGACATGGAGCTAGGTGGACGAATGATCCCACGTGGCACGGAGTTTTTGATTCCAATCCTCGCCGTTCATCACGATCAAACTATTTGGGGCAACGATGCGAGTGAGTTTAATCCAGAGCGATTCTCGGATGGAGTAAGTCGAGCTGGAAATCATCCGGTTGGGTTCATTCCATTCGGACTTGGGGTTCGGAATTGCATCGGCCAAAATCTAGCAATTTTGGAAGCAAAGTTGGCAATGGTGATTATACTTCAACGTCTCTCGTTTCGATTGGCTCCTACTTATCAACATGCACCGACTGTCCTGATGCTTCTTTATCCACAATATGGCGCTCCCATTCTTTTCGAAAAGATACCCTTAAATTAA 1575 45.97 MKEELESAVEVPFGVAAAAVVAAAVVILGAKMGLVLWWKPRRMENHFLRQGIGGPRYRFFIGNFKELVSMMAAASSHPMPKFSHNILPRVLSFYHHWKKIYGSTFLIWFGPIARVAVSDPDMIREIFITNSHLYEKNEAHPLVKQLEGDGLLTLNGPKWALHRKIISPTFHSDNIKLLIPLIEEIIVEMVQKWSSMAEETTLGGVEIDVFDSFQTLTEDVITKTAFGCSYEDGKAIFKLQTQQMILASEAFQKVFIPGYRFLPTRTNMKSWKLEKEIKKSLIKLIEGRKRNFEKNWAINEKGPKDLLGLMIQASISVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQILARHEVFTICGPRALPSPDDVSKFKILSMILNESLRLYPPTVATIRRANADMELGGRMIPRGTEFLIPILAVHHDQTIWGNDASEFNPERFSDGVSRAGNHPVGFIPFGLGVRNCIGQNLAILEAKLAMVIILQRLSFRLAPTYQHAPTVLMLLYPQYGAPILFEKIPLN 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2620518 2623138 - CmaCh10G005730.1 Cma10g00573 301889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00573 524 Gene3D Cytochrome P450 36 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Cma10g00573 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 516 - -
Cma10g00573 524 PANTHER CYTOCHROMEA2 25 516 - -
Cma10g00573 524 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 Pfam Cytochrome P450 91 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 SUPERFAMILY Cytochrome P450 49 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00573 524 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00573 Cma12g01226 CCT
Cma05g01311 Cma10g00573 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00573 Cma-Chr10:2620518 Cma10g00756 Cma-Chr10:3444531 1.06E-140 dispersed
Cma10g00573 Cma-Chr10:2620518 Cma11g00556 Cma-Chr11:2693602 0 wgd
Cma10g00573 Cma-Chr10:2620518 Cma12g01226 Cma-Chr12:9549605 0 wgd
Cma10g00573 Cma-Chr10:2620518 Cma05g01311 Cma-Chr5:9941119 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00573 K15639 - csv:101213466 853.203