Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00738 ATGGAGGATCATCGGAAGGTTGAAGCCGAGGAAGAAGACGAAGTGGGAACCGCCGCCGAGGAGGAGGAGGAAGAAATCGGAGTTGTGGGTTCGAGATTGACTCTGGAGAATGTCGCTGCAGCCAAACAGTTCATTGAGAATCATTACAAGGCTCAAAAAAAGCACATTCAAGAACGCAAAGAGAGGCGTTCCGTGCTTGAAAAGAAGTTGGCATCTTTAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAAGATTTGGAGCTCAAGGAGACTCAATACATGAGGCTGAAAAGGCATAAAATTTGTGTCAGGCTTTGTCGAGAGAAGAAAACAGGCAACATCTATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAATACTTGTATCTTATCATGGAGTATCTTCCAGGAGATATAAAACCTGATAACCTTCTATTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTATCTTCTATAAATGAAAATGTAGTCCTTGACAACGAAAACTTGCCTGACACGGTGGACGTGGACGAGAGCTTTCCAGATAAGTGGTCCCTTGGTGCAATAACGTACGAAATGCTTGTCGGTTATCCGCCATTTTATTCTGATGATCCAATAACAACATGTCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGTCAAGATTATCACCTGAAGCAAAAGACATGATAAGTAGGCTGCTCTGCAATGCTGAGCATAGGCTTGCATTTAAGCCCGAGGTCAACGACGAACTCGATATGCAGAATTTTATGCAGTTTGATGAGGTCAATCCACCGCCAACTAGAACCGGATCTGGACCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCTGTCAAAGGGCTACACCATTCATTTGATTTGAAGTCGAGCACCACCCCAACTCGGACTTCGTCTGTTGACTCTACTAAAAGTAAGAGATTCAAGGGAACTATACTTATCGATTTCGAGTTTTGTGACAAGCTTCTTAGGACATCTTGTACAGGTGACTCGGCATTGATCAGCTACTCAACAGAGGACAGGGAAGCCATATTGGCACCATCAGGGGATGCTTTGTCACAGTAA 1275 42.35 MEDHRKVEAEEEDEVGTAAEEEEEEIGVVGSRLTLENVAAAKQFIENHYKAQKKHIQERKERRSVLEKKLASLDVSEEEQINLLKDLELKETQYMRLKRHKICVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSSINENVVLDNENLPDTVDVDESFPDKWSLGAITYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPDESRLSPEAKDMISRLLCNAEHRLAFKPEVNDELDMQNFMQFDEVNPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLHHSFDLKSSTTPTRTSSVDSTKSKRFKGTILIDFEFCDKLLRTSCTGDSALISYSTEDREAILAPSGDALSQ 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3347570 3356700 + CmaCh10G007380.1 Cma10g00738 302054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00738 424 Gene3D Phosphorylase Kinase; domain 1 102 174 - -
Cma10g00738 424 SUPERFAMILY Protein kinase-like (PK-like) 104 321 IPR011009 -
Cma10g00738 424 MobiDBLite consensus disorder prediction 1 26 - -
Cma10g00738 424 SMART serkin_6 97 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00738 424 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 26 172 - -
Cma10g00738 424 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 294 380 - -
Cma10g00738 424 PANTHER SERINE/THREONINE-PROTEIN KINASE 173 208 - -
Cma10g00738 424 ProSiteProfiles AGC-kinase C-terminal domain profile. 279 353 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cma10g00738 424 Pfam Protein kinase domain 173 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00738 424 Pfam Protein kinase domain 104 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00738 424 PANTHER SERINE/THREONINE-PROTEIN KINASE 229 293 - -
Cma10g00738 424 Gene3D Transferase(Phosphotransferase) domain 1 175 331 - -
Cma10g00738 424 ProSiteProfiles Protein kinase domain profile. 4 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma10g00738 424 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 229 293 - -
Cma10g00738 424 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 172 - -
Cma10g00738 424 PANTHER SERINE/THREONINE-PROTEIN KINASE 294 380 - -
Cma10g00738 424 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 173 208 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00738 Cma11g00709 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00738 Cma-Chr10:3347570 Cma17g00158 Cma-Chr17:800797 4.18E-126 dispersed
Cma01g01718 Cma-Chr1:11666023 Cma10g00738 Cma-Chr10:3347570 1.90E-170 wgd
Cma10g00738 Cma-Chr10:3347570 Cma11g00709 Cma-Chr11:3453691 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68850 PF00069 Pkinase 1.90E-16 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00738 K08790 - csv:101208238 600.897