Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00745 ATGAGTGGACCAGTTAACATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAAAACTAGCTTGGATTGACGGGGAAGTTTTTCGAATCAATGGCGAGGAAATTCACGTCCGGGCTACCAATGGGAAAACAGTTGTTACAAATATATCGAAGATATACCCCAAGGATACCGAAGCACCTGCTGCAGGTGTAGATGACATGACAAAGCTGTCATACTTGCACGAACCGGGAGTTTTGAGCAACTTGGCGACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCAATAAACCCATTCCAAAGATTACCCCATCTGTATGATATTCACATGATGGAACAATACAAAGGAGCTGGTTTCGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCGGAAGTGGCATACCGGGCTATGATTAATGAAGGAAAAAGCAATTCAATCCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACCGAGACCACGAAGATGCTTATGCGGTATCTTGCGTACCTTGGAGGTCGATCTGGAGTGGAAGGGCGAACCGTTGAACAACAAGTCCTAGAATCCAATCCTGTTCTTGAAGCGTTCGGAAATGCGAAAACTGTTAGGAACAATAACTCAAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGCGGGAGAATCTCTGGCGCAGCTGTCCGAACTTACTTGCTTGAAAGGTCTCGAGTATGTCAGATCTCGGATCCCGAAAGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCTTGAGGAACGGGCGAAGTATAAATTAGAAAACCCGAAATCGTTCCACTACTTAAATCAATCTAGCTGCTTTGAATTGGATGGCGTGAACGATGCCCATGAGTATCTCGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGTGAGGAGGAGCAGGACGCGATTTTTAGGGTCGTGGCTGCAATTTTGCATCTTGGAAATATTGAATTCTCAAAGGGAGAGGAGATTGATTCTTCAGTCATTAAGGATGAAAAATCAAGATTTCATCTTAATACGACTGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAAGTTGCACTGATTCAACGTGTTATGGTAACGCCAGAAGAAGTTATAACTCGAACTCTTGATCCTGTGGCTGCTTTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGACTCTTTGACTGGCTTGTGGAGAAGATCAACAATTCAATTGGGCAGGACCCGAACTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTCGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTCACAAATGAAAAACTGCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATCGAGTTTGTTGATAACCAGGACGTCTTGGATCTGATCGAAAAGAAACCGGGGGGAATTATCGCACTTTTGGATGAGGCCTGCATGTTTCCTAAATCTACGCATGAAACGTTTGCTCAAAAGTTATACCAAATGTTCAAGAACAACAAGCGCTTCATCAAGCCGAAGCTATCTCGTACGAGTTTTACAATATCTCATTATGCTGGCGAGGTGACTTATTTGGCAGATCTATTCTTGGACAAAAACAAAGACTACGTGGTAGCCGAACATCAGGCGCTATTGACATCCTCGAAATGTTCCTTTGCAAGAGCTTTATTTCCTCCTCAACCCGAGGAAACATCAAAATCCTCAAAATTTTCTTCCATCGGTTCACGTTTTAAATTACAACTTCAATCGTTAATGGAGACGTTAAATTCGACCGAACCTCACTACATCAGATGTGTAAAGCCAAATAATGCGCTCAAGCCTGCTATTTTCGAGAATTCAAATGTTATCCAACAATTACGTTGCGGTGGTGTCCTTGAAGCGATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACGTTTTACGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTTTGGACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGTTTGAAAGGTTATCAGATTGGTAAGACAAAAATATTCCTGAGGGCAGGGCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTAGAACGTTTATTGCACGCAAGGAGTTCGTTGCATTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAATCTATTTGAACAGCTACAACGGGAAGCAGCAGCTTTAAAAATCCAGAAGTGTTTCAAGCGATATACTGCTCGGAAGTCATACTTAGATTTTCTTTCATCAGCAATCACATTGCAAACAGGGTTACGGGCAATGAAGGCTCGTGACGAATTCAGATTTAGAAGGCGTACTAAGGCAGCAATTATCGTTCAGGCACGTTTGCGTTGTCACATGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTAACCACACAGTGTAGTTGGAGGCGACGAGTCGCCCGAAAGGAGCTAAGAAAACTGAAAATGGCTGCAAAGGAAACCGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTCGAAGAACTTACATGGCGCTTACAACTCGAGAAGCGGATGAGGACTGACCTGGAAGAGGAGAAAGCTCAAGAAATTGCTAAATTACAAGATGCTTTACACAATATGCAATTACAAGTTGAAGAAGCAAATGTTCGAGTTATCAAAGAACGAGAGGCGATTCAGAAAGCTATTGAAGAAGCACCTCCAGTCGTCAAGGAAACTCCCGTTTTCGTTGAGGATACCGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTGAAGGCTTCATTGCTGTTGGAGAAAACGGCAGCTGAAGAAGCTAGAAAAGCTTGTACCGAAGCCGAAGCTAAAAGTATGGAGCTGACCAAAAGACTTCAAGATTCAGACAAGAAGGCGGATCAGCTTCAGGAGTCGGTGCAGCGGCTTGAAGAGAAGCTTTCAAATTCGGAATCAGAGAACCAGGTACTTCGTCAACAAGCCTTGACTATGTCACCGACGGGAAAAGCTTTATCTGCAAGACCGAAGTCGATGATTATTCAGAGGACACCAGAGAATGGAAATATTTCGCACGGAGAGGTCAAAGTATCATCGGATACAGCTCTTGCATTATCGAATCTACGCGAGCCTGAATCAGAAGAAAAACCACAGAAATCGCTTAATGAAAAGCAGCAGGAGAACCAGGACCTTCTAGTAAAGTGCATATCAAAAGACTTGGGCTTTTCTGGAGGCAAACCAGTAGCAGCTTGTGTCATATACAAATGTCTTCTTCACTGGAGGTCGTTCGAAGTCGAACGAACGAGCATATTCGATCGACTCATTCAAACAATAGCTTCGTCGATAGAGGTCCAGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACATTATTGTTGCTCCTTCAACATACACTGAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGAAGAACTTCTACAGCTTCTCTTTTCGGAAGGATGTCTCATGGATTAAGGGGATCTCCGCAAAGTGCTGGACTATCGTTTCTTAATGGTCGGGGGCTGGGTCGAGTGGACGATTTTCGACAGGTTGAGGCGAAGTATCCAGCACTGTTGTTTAAGCAGCAGCTTACGGCGTTTTTGGAGAAAATATATGGAATGATAAGAGATAATATAAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGCTCCAAGGACATCAAGGGCAAGCCTAGTGAAAGGACGTTCCCAAGCTAATGCTATGGCTCAACAAGCCTTAATTGCATATTGGCAAAGCATTGTGAAAAGTTTAAACAATTGCTTGAAGATCATGAAAGCAAACTACGTACCTCCGTTCCTCGTCCGCAAAGTTTTCACTCAGATATTTGCGTTCATTAACGTTCAACTATTTAACAGCCTTCTTTTGCGGCGTGAGTGTTGTTCGTTCAGCAACGGAGAGTATGTGAAAGCTGGGTTGTCTGAATTAGAACAGTGGTGCTCGGAAGCAACAGAGGAATATGCTGGGTCTGCCTGGGATGAACTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTTATTCATCAAAAACCCAAAAAGACCTTGAATGAGATAACAAAAGATCTGTGTCCTGTGCTTAGCATACAACAGTTATATAGGATTAGTACAATGTACTGGGATGACAAATATGGCACGCATAGTGTATCTTCGGAAGTTATTTTGAGTATGCGAATTTTGATGACTGAAAACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGATTCGAGTATCCCATTTTCTGTGGATGATATTTCCAAATCAATGAACCAAGTAGACGTAACAGACATTGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTGA 4584 42.34 MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEIHVRATNGKTVVTNISKIYPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDIHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPLEERAKYKLENPKSFHYLNQSSCFELDGVNDAHEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEVALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQMFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTSSKCSFARALFPPQPEETSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARNLFEQLQREAAALKIQKCFKRYTARKSYLDFLSSAITLQTGLRAMKARDEFRFRRRTKAAIIVQARLRCHMAYSYYTRLQKAALTTQCSWRRRVARKELRKLKMAAKETGALKEAKDKLEKRVEELTWRLQLEKRMRTDLEEEKAQEIAKLQDALHNMQLQVEEANVRVIKEREAIQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLLEKTAAEEARKACTEAEAKSMELTKRLQDSDKKADQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNISHGEVKVSSDTALALSNLREPESEEKPQKSLNEKQQENQDLLVKCISKDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRLIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTSTASLFGRMSHGLRGSPQSAGLSFLNGRGLGRVDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNIKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAYWQSIVKSLNNCLKIMKANYVPPFLVRKVFTQIFAFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVILSMRILMTENSNNAISSFLLDDDSSIPFSVDDISKSMNQVDVTDIDPPPLIRENSGFGFLLQRAE 1527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3388762 3403369 + CmaCh10G007450.1 Cma10g00745 302061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00745 1527 CDD MyosinXI_CBD 1111 1493 IPR037975 GO:0007015
Cma10g00745 1527 Coils Coil 875 955 - -
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 733 762 IPR000048 GO:0005515
Cma10g00745 1527 PANTHER MYOSIN-5 6 1523 - -
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 806 833 IPR000048 GO:0005515
Cma10g00745 1527 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Cma10g00745 1527 Pfam Myosin head (motor domain) 64 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 Gene3D - 667 728 - -
Cma10g00745 1527 MobiDBLite consensus disorder prediction 1011 1040 - -
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Cma10g00745 1527 Pfam DIL domain 1347 1450 IPR002710 -
Cma10g00745 1527 Gene3D - 784 830 - -
Cma10g00745 1527 Gene3D - 831 880 - -
Cma10g00745 1527 Gene3D - 731 783 - -
Cma10g00745 1527 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 781 810 IPR000048 GO:0005515
Cma10g00745 1527 Coils Coil 994 1049 - -
Cma10g00745 1527 ProSiteProfiles Dilute domain profile. 1160 1471 IPR002710 -
Cma10g00745 1527 Pfam Myosin N-terminal SH3-like domain 9 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 783 881 IPR027417 -
Cma10g00745 1527 Gene3D - 439 623 - -
Cma10g00745 1527 Gene3D Kinesin motor domain 65 662 IPR036961 -
Cma10g00745 1527 SMART DIL_2 1346 1453 IPR002710 -
Cma10g00745 1527 SMART iq_5 828 850 IPR000048 GO:0005515
Cma10g00745 1527 SMART iq_5 851 873 IPR000048 GO:0005515
Cma10g00745 1527 SMART iq_5 780 802 IPR000048 GO:0005515
Cma10g00745 1527 SMART iq_5 732 754 IPR000048 GO:0005515
Cma10g00745 1527 SMART iq_5 803 825 IPR000048 GO:0005515
Cma10g00745 1527 SMART iq_5 755 777 IPR000048 GO:0005515
Cma10g00745 1527 Gene3D - 252 310 - -
Cma10g00745 1527 MobiDBLite consensus disorder prediction 1011 1043 - -
Cma10g00745 1527 CDD MYSc_Myo11 76 718 IPR036018 -
Cma10g00745 1527 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Cma10g00745 1527 ProSiteProfiles Myosin motor domain profile. 62 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 783 IPR027417 -
Cma10g00745 1527 SMART MYSc_2a 56 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cma10g00745 1527 Pfam IQ calmodulin-binding motif 783 801 IPR000048 GO:0005515
Cma10g00745 1527 Pfam IQ calmodulin-binding motif 735 753 IPR000048 GO:0005515
Cma10g00745 1527 Pfam IQ calmodulin-binding motif 854 873 IPR000048 GO:0005515
Cma10g00745 1527 Pfam IQ calmodulin-binding motif 757 776 IPR000048 GO:0005515
Cma10g00745 1527 PANTHER MYOSIN 6 1523 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00745 Cma11g00715 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g01225 Cma-Chr5:9410210 Cma10g00745 Cma-Chr10:3388762 0 dispersed
Cma10g00745 Cma-Chr10:3388762 Cma12g01141 Cma-Chr12:8982701 0 dispersed
Cma18g00811 Cma-Chr18:7087234 Cma10g00745 Cma-Chr10:3388762 0 dispersed
Cma10g00745 Cma-Chr10:3388762 Cma11g00715 Cma-Chr11:3486196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00745 K10357 - csv:101204300 2821.96