Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00756 ATGGAGTATTTTGTGTTCTATTCTTTGGCACTTTGCTTGGTTGTTTTTGGAGTGGCAAAAGCTTTCTACTCCATTTGGTGGAGACCCAAATTGGTGGAGAGACAGTTGAAAAGACAAGGAGTTAGGGGCAGTGCCTACAAGCCTTTGGTTGGTGATGCCAAAGAGTATGTGAGCATGATCACTGAAGCATGGTCGACCCCCATGAATCTAGACCATCAGATCACTCAACGTGTCGATCCGTTCACTGCAGTGTATGCTAAAAAATATGGAAAGTTATCGATGTGCTGGTTTGGGACAAGTCCGAGATTGATGGTGAAGGACCCCGAGATGATGAAAGAAGTACTATCAAACAAGGAGGGTAGCTTTGAGAAGCCACCGATGAACCCACTTATTCTGAAGCTGACCAAGGGATTAACTACTCTTAAAGGGGAGGAATGGGCTAAACACAGGAGGATCATCAATCCTGCTTTTCATCTGGAAAGGCTCAAGGGAATGATGCCAGCCTTCCAAATAAGCTGTAGCGACATGATAGAGCGCTGGAAGGAGATGGCTGGAAATCAAGAGAGTGTTGAAGTGGAGGTGTGGCCTGAAATTCAGAGACTAACAGCAGATGTTATATCCAGGGCAGCCTTTGGCTCCAACTTTGAAGAAGGGAAGAAACTTTTTGAACTTCTCAAACAACTCACTCTTTTTACTGTTGAAGCCATGCAGACCTTGTACCTTCCTGGTTTCAGATTTATTCCAACAGCTAAGAACAGGAGGAGAGAGAAGCTGAACAAGGAGATCAAGACCATAATAGAGAGTATAATTCTAAGAAAAGAAAATTCCATGAGCAACCAGGAAGAGAATGTTGATGACTTGTTATGCATGCTCTTGCAGTCGAGGAAGAAAGAAAATCAACATGAAGGTGATGGACTGACAACTGAGGAAGTGATCGAGGAGTGCAAGCAGTTCTACCTTGCAGGGCAGGAAACAACATCAAGCTTGATTACATGGACAGTCATCGTTTTGGCCATGCACTCAGAATGGCAAGAAAAGGCTAGACAAGAAGTCTTGCAAATTTGTGGGAAGAATGAACCAACTTTTCAAAATTTAAACCACTTAAAGATTGTTACCATGATACTTAATGAAGTCCTGAGGTTATACCCACCAGTTATTGCTCAATATCAACATACTTATGCAGAAACAAAGATAGGTGAAGTCTTAATACCTGCCGGGGTTGATGTTACCTTAGCTACGCTGCTTATTCACCACGATCCCGAGTACTGGGGAGATGATGCAGAAGAGTTCAAACCTGAGAGATTCTCCGCAGGAGTTTCAAAGGCAAGCAAAGATCAGTTGGCCTTCTTTCCCTTTGGCTGGGGACCTAGGACCTGCGTTGGACAAAATTTTGCTATGTTAGAAGCTAAGATCGCATTGGCTATGATTCTACAGAATTTCTCTTTTGAGCTCTCACCTTCTTACGCACATGCTCCTCATACTGTCATGACTCTTCAACCACAGCATGGAGCCCAGCTGAAAGTTCACCAACTATAG 1536 43.62 MEYFVFYSLALCLVVFGVAKAFYSIWWRPKLVERQLKRQGVRGSAYKPLVGDAKEYVSMITEAWSTPMNLDHQITQRVDPFTAVYAKKYGKLSMCWFGTSPRLMVKDPEMMKEVLSNKEGSFEKPPMNPLILKLTKGLTTLKGEEWAKHRRIINPAFHLERLKGMMPAFQISCSDMIERWKEMAGNQESVEVEVWPEIQRLTADVISRAAFGSNFEEGKKLFELLKQLTLFTVEAMQTLYLPGFRFIPTAKNRRREKLNKEIKTIIESIILRKENSMSNQEENVDDLLCMLLQSRKKENQHEGDGLTTEEVIEECKQFYLAGQETTSSLITWTVIVLAMHSEWQEKARQEVLQICGKNEPTFQNLNHLKIVTMILNEVLRLYPPVIAQYQHTYAETKIGEVLIPAGVDVTLATLLIHHDPEYWGDDAEEFKPERFSAGVSKASKDQLAFFPFGWGPRTCVGQNFAMLEAKIALAMILQNFSFELSPSYAHAPHTVMTLQPQHGAQLKVHQL 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3444531 3447578 + CmaCh10G007560.1 Cma10g00756 302072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00756 511 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 SUPERFAMILY Cytochrome P450 76 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00756 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 506 - -
Cma10g00756 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cma10g00756 511 PANTHER CYTOCHROME P450 72A15-LIKE 8 506 - -
Cma10g00756 511 Pfam Cytochrome P450 81 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g01311 Cma-Chr5:9941119 Cma10g00756 Cma-Chr10:3444531 2.52E-148 dispersed
Cma07g00885 Cma-Chr7:4177829 Cma10g00756 Cma-Chr10:3444531 4.48E-36 dispersed
Cma09g00170 Cma-Chr9:722558 Cma10g00756 Cma-Chr10:3444531 1.44E-157 dispersed
Cma10g00573 Cma-Chr10:2620518 Cma10g00756 Cma-Chr10:3444531 1.06E-140 dispersed
Cma10g00756 Cma-Chr10:3444531 Cma11g01020 Cma-Chr11:5532841 3.35E-148 dispersed
Cma16g00734 Cma-Chr16:3867166 Cma10g00756 Cma-Chr10:3444531 3.09E-48 dispersed
Cma10g00756 Cma-Chr10:3444531 Cma10g01055 Cma-Chr10:6520871 1.08E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00756 - - cmo:103492359 905.59