Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00795 ATGGGGAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCTTCAGAAACGTACAGCTTAGATGCTAATCTATGCCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCGGATTTCAGCCTTTCTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTCTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTTGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCGGAGGCAATCAACATCGAGGGACTGTCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAGCTCTGGTTGGATTCTTGAGAAAGGCCATGGAAAGGGCCAACTTGTTGTTATACCACCAAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGTTAA 699 45.78 MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLSLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVASSGWILEKGHGKGQLVVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3657752 3660479 + CmaCh10G007950.1 Cma10g00795 302111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00795 232 Gene3D ARM repeat; domain 1 8 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Cma10g00795 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Cma10g00795 232 Pfam CSN8/PSMD8/EIF3K family 67 194 IPR033464 -
Cma10g00795 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 8 232 - -
Cma10g00795 232 SUPERFAMILY Winged helix DNA-binding domain 137 229 IPR036390 -
Cma10g00795 232 SUPERFAMILY ARM repeat 10 135 IPR016024 -
Cma10g00795 232 Gene3D - 128 230 IPR036388 -
Cma10g00795 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Cma10g00795 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00795 Cma11g00761 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00795 Cma-Chr10:3657752 Cma11g00761 Cma-Chr11:3699427 4.10E-169 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00795 K15028 - csv:101214255 443.351