Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g00831 | ATGAGGCTCCAAGTGAACGACGGCGATGTCGACGACGATCTTGTTCCTCCCCCCAACTTCTCCAGTGTTGAGGATGGCATTTTCCGATCCGGCTTCCCTCAGCCTTCCAATTTTCCCTTCCTCAAGAATCTAAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAGAGCTAATAACATCAAGCTTTTTCAATTCAAAATTGAAGGGACAAAGGAGCCTTTCGTTTCTATTCCGAAGGATGCTATTCTGGAAGCCCTAAAAATCCTAATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTCGTGGGTTGCCTGAGGAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATATGCAGGCGTGAAATCAAGGGCGACGGATCTACAATTCATTGAGGCATTCGACATAGAGCCTCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGGTATAGCTCAAACAAGAGAAGGCTGTTGTACAGAGAAGAGAAGTTGCAGAAGCCCCAAACAACACCAGGTTTCTCACCCAAAATCTCTCCTCTTGTTGATCGATGGTTTCTCCTCACAAATCGGCACGGAGGGAAAAAAAAAAAAAAAAACACCAACAATCGATCAGCCATGACGGGTAAGGCGAAGCCGAAGAAGCATACGGCAAAAGAGATCCAGGCGAAGATCGACGCAGCTACCACCAACAGAGGCGGCGGAAAGGCCGGGCTTGCAGACCGGTCCGGCCAAGAAAAAGGTGGTCACGCGAAGTTCGAGTGCCCACACTGTAAGATTACAGCGCCTGATGTTAAAACTATGCAGATTCATCACGAGTCGAAGCATCCCAAAATCCCTTATGAGGAAGACAAGGTTGTGAATCTCCACGCTGTTCGTGTTGCTGCTGAGGCGTCTAAGCCCAAACCGGGTGTGAGAGGCAGCTTCAAGAAGTGA | 1017 | 48.18 | MRLQVNDGDVDDDLVPPPNFSSVEDGIFRSGFPQPSNFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGTKEPFVSIPKDAILEALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRYAGVKSRATDLQFIEAFDIEPLRQCVYSIIYQYQGYSSNKRRLLYREEKLQKPQTTPGFSPKISPLVDRWFLLTNRHGGKKKKKNTNNRSAMTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGLADRSGQEKGGHAKFECPHCKITAPDVKTMQIHHESKHPKIPYEEDKVVNLHAVRVAAEASKPKPGVRGSFKK | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3888135 | 3892337 | + | CmaCh10G008310.1 | Cma10g00831 | 302147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g00831 | 338 | MobiDBLite | consensus disorder prediction | 257 | 278 | - | - | |
Cma10g00831 | 338 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 19 | 170 | IPR020422 | GO:0006470|GO:0008138 | |
Cma10g00831 | 338 | MobiDBLite | consensus disorder prediction | 220 | 245 | - | - | |
Cma10g00831 | 338 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 14 | 160 | IPR029021 | - | |
Cma10g00831 | 338 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 10 | 182 | - | - | |
Cma10g00831 | 338 | SUPERFAMILY | Expressed protein At2g23090/F21P24.15 | 260 | 310 | - | - | |
Cma10g00831 | 338 | Pfam | Tyrosine phosphatase family | 14 | 164 | IPR004861 | - | |
Cma10g00831 | 338 | CDD | PFA-DSP_Siw14 | 14 | 160 | - | - | |
Cma10g00831 | 338 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 101 | IPR020428 | GO:0016791 | |
Cma10g00831 | 338 | PRINTS | Plant and fungal dual specificity phosphatase signature | 14 | 31 | IPR020428 | GO:0016791 | |
Cma10g00831 | 338 | PRINTS | Plant and fungal dual specificity phosphatase signature | 70 | 84 | IPR020428 | GO:0016791 | |
Cma10g00831 | 338 | PRINTS | Plant and fungal dual specificity phosphatase signature | 51 | 64 | IPR020428 | GO:0016791 | |
Cma10g00831 | 338 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE DSP5 | 10 | 182 | - | - | |
Cma10g00831 | 338 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 162 | IPR029021 | - | |
Cma10g00831 | 338 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 109 | 119 | IPR016130 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00831 | Cma-Chr10:3888135 | Cma20g00235 | Cma-Chr20:1119634 | 4.21E-74 | dispersed | |
Cma10g00831 | Cma-Chr10:3888135 | Cma11g00940 | Cma-Chr11:4935931 | 4.02E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g00831 | K18045 | - | csv:101211082 | 348.591 |