Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00855 ATGATGAAGACACAAGGATATGTTAAAGGAAGAACAGCAACCAAGGTTACTGCACAACAGTTAGTTTTTGAGTTGAAACAGAAGGTGGTTCTTGCACTAAACAAGCTTGCAGATCGAGACACTTACCAAATTGGGTTTGATGAGCTTGAAAAAACAGCTGAATGCATAGCTCCTGACATGATTCCCCCTTTCTTGTCCTGTATTTTGGACACGGATTCGGAGCAGAAGAGCTCGGTTCGACAGGAATGCGTTCGGCTAATGAGTACACTAGCCAAATTCCATGAAGGTCTTATTAGGCCTCATCTTCGTAGAATGGTTGGCAGCATTGTGAAACGGCTCAAGGATCCTGATTCTGCTGTGAGGGATGCGTGTGTGGAGACATGTGGAATTTTAGCTTCAAAATTGATTAATGTTGGGGATGAGAGTGATGATGTCTTTGTTACTTTAGTTAAACCAATCTTTGAAGCTTTGGGGGAACAACATAAGCAAATGCAATCAGGTTCAGCGTTTTGCTTGGCAAGGATTATCGACAACACTCAGGATCCGCCTGTTTCGATTTTGCAGCGGATGTTGGCAAGAACCACAAAGCTACTTAAGAATCCACACTTCATGGCAAAGCCTGCTGTGATTGATTTGAACAGAAGTATTATCCAGGCTGGGGGTGCTTCAAATCAAAATGTTCTCTCTGCTGCAATGCTTGGCATCCAAGAAGCTCTCAAGAACAGTGATTGGACGACTCGAAAAGCTGCTTCCGTTGCGTTAGGTGAAATCGCCGCAAGCTGTGGGTCCTTCGTCGGGTCTTTTAAGGCTTCCTGCATTCGCTCCCTCGAATCATGTAGATTTGACAAGGTGAAGCCAGTTAGGGACATTGTACTCCAGACCCTTCAGTATTGGAACAACATTCAAGGGCCAGATACTCCTGAACCTTCAGAAGCTGGTTCATCCATTAAAGAAAACCTTTGTGGGGGTGACTTCAGTGATGTTACTAGTTCAATGGAACATGGAAAGAAGGATGCTGCCATTAGGAAAGTAGGCGTGGGCTCTACAAGAGGGAGGATTCCACTAAACATGAGAAAGACCTGTCCAAGTTATTTGGAGAACACACAGCATTTCAAAGCAAATGATTGTCATATTGAAATAGCTGTTCCACAAAAGCGCAACCAGTCATTGTCAGGATTTCACACAGAGGAATCTGAAGGGAGTACTGTCACAAAGACATTTCAAGGAGTGAGCACTGATGTTACAGACATACAAGATGTTGAATATGATTATGTCAGAATGGATGACAGACAAGACTGTTCTTCTGTGTCCAGTTTTTTACCTGGTCGGGAATTCGGAATGGTTTGTCGTGAGAGTCTTGAAGACAGCAGTGTGCATAAGTCAACTGATAGAAGTAAGCGATTTGTCAATGAAGGGGTTTGTAGCGAGGAGCAGATGTACTCGACACCAGTGATGGATCGTAGAAGTCTCGAGTCCGTGGTCACAGAGTCTAGTTGTCGAATTGTACAAGAATGTGACTCGGAAGTTGCAAATGATATGGTCTGCATTCGAAAGCATCTCCTGGAAATTGAAAACAAGCAGTCCAACTTGATGTATTTATTCAAGGAGTTCACTTCGGGCGTAATGGACAGCTTGTCGGTGATACAATCAAGGGTTGTCGGATTAGAACACGTCGTTTACGGATTATCTCAGGATCTTTTGAATGGTAATAGGCCTGCTGATCATTCAAACTCAAAGTTCATGAAGCAGAACCAAAGCTTGAATTCTCCTAGGCTTTCGACGTGCACTCCGAGGTCATCGGTTGATATTCCAAGCAGACAGTCTTCGTTATCGTCGCTTAAACATTCTAGCATATGGGATGAAAACGTTGCTGTTAGGAGCCGGTCGAGTAATGCAACTAAACATGGAACTGATATTTGGAGAAAGGCTAATCCAGTCAAGAAGCCTCCTGAGAAGGATCTTCAGAAATATTGTGGAGAGGCAATACAAAACAGTAGCAGCCGTCACTTGGGAAAGACTAATACAGTGTTTTCTTCATTCCCCAGTGCTAATGTTAGACAAGTTTCTGATGGAAAGAACAGCATTTCGAGACGTGTGTCTGGTTTCCTACGTCAAGGCGATGTTGATGCAGCATACATGGAAGCCTTGGGTTCGGGTGATGAAGTTGTTCTGTTTGAACTTCTTGATCAAACAGGGCCTGTTCTTGAATGTTTGTCAACTAAAACTATCAGCAATATCCTTCGTATATTGGCATCATTCCTTCCTGAACGAAGATTTATTCGCTGTATAATACCATGGTTGCAGCAGGTAGTTGAGTTGAGCACAATCCATGGGGCGAATTCTCTCGGACTCTCAGCCAAAGAAAGACAAGAATTTGCACTTGCCATCCAGGAGGCTTCAAAAAGTGAACTTTCTAATCCTGCAGAAACAAGACTTGTCACTCAGCTAGCAACAAAGCTGGCAATGCTCGTGATGGCTAGGCGGCAAATCTCAATGGCAAGGCCTTGTTTCCAAAGATTTCTATACTGGATTTCAGTTCAAAACCAGTGGAAGCTCAGAAAAGCTCCACACGTAACAATGGAGGATTTCCTCATCTCTCTCTTGATCCTCTTCCTCTCCTTCATCTCTCTCACTCTATTTGTCCTGTTTTACAAGCACAAATCCTTATTCTCCTATCCCAACACTCCTCCCGGCGCCATCGGCCTTCCGATCATCGGCGAGAGCCTCGAGTTCTTATCCACCGGCTGGAAAGGCGAGCCTGAGAAGTTCATCTTTGATCGTTTGAATAAGTACAAGTCTGATATCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGTGTGCAACAAGTTCCTATTCTCCAACGAGAATAAACTTGTTACCTCCTGGTGGCCGGATTCCGTCAACAAGATCTTCCCCGCTTCCACTGAGATCAACTCAAAAGAGTCAGCTATACGACTTAAGAAGCTCCTCCCGCGGTTCCTTAAACCGGAAGCTCTCCAGCGTTATATTGGAGTCATGGACGAACTTGCTCAACGCCATTTCGCTTCCTCCTGGGAGAACAGAGAACACGTCCTCGTGTTTCCTCTAGCCAAAAGTTTCACATTCTCGCTCGCTTGCCGATTGTTCTTGAGCCTCGAGGATCGTATCCACGTCGAAAGATTGTCGGAACCATTCCAGAACATTGCGGCAGGAATCATATCGATGCCGATCGATTTGCCAGGAACGCCGTTCAACCGAGCGATTAAGGCGTCAAACTTCGTCAGAAAGGAACTACTCTCGATCGTGAGGCAGCGGAAATCGGATCTGGCTGAAGGAAAGGCGTCCCCGACGCAGGACATTCTGTCTCACATGCTTCTCACCTGCGATGAAATCGGACAGTACATGAACGAATCTGCTATCGCCGATAACATCCTCGGCTTGTTGATAGGAGGCCATGACACTGCCAGTGCTGCATGCACCTTCATCGTTAAGTACCTCGCTGAGCTTCCTCAAATCTACGACCGCGTCTACAGAGAGCAAATGGAAATAGCAAAAGCAAAAGCCAAAGCCAAAGGGGAGTTATTGAAGTGGGAAGACATTCAGAAGATGAAGTATTCGTGGAATGTCGCCTGTGAGGTTCTAAGACTTGCTTCCCCACTTCAAGGTGCCTTTAGGGAAGCCATTAATGACTTCGTTTTCAATGGCTTCAACATTCCCAAGGGCTGGAAGCTATATTGGAGTTCAAACTCAACACACAAAAACCATGCGTACTTCCCAGAGCCCTACAAATTTGATCCATCGAGATTTGAGGGCAATGGCCCTGCGCCCTACACCTTTGTGCCCTTCGGCGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTACGCCAAGCTCGAGATTCTCGTCTTCATGCACAATTTGGTGAAGAGATTCAAATGGACAAAGCTCCTGGAGAAGGAGAAGATCATTGTTGACCCATTGCCAATCCCTGAGAAAGGTCTGCCCGTTCGCCTTTTTCCTCATAAAACTCTCTCTCTTTAG 4035 45.63 MMKTQGYVKGRTATKVTAQQLVFELKQKVVLALNKLADRDTYQIGFDELEKTAECIAPDMIPPFLSCILDTDSEQKSSVRQECVRLMSTLAKFHEGLIRPHLRRMVGSIVKRLKDPDSAVRDACVETCGILASKLINVGDESDDVFVTLVKPIFEALGEQHKQMQSGSAFCLARIIDNTQDPPVSILQRMLARTTKLLKNPHFMAKPAVIDLNRSIIQAGGASNQNVLSAAMLGIQEALKNSDWTTRKAASVALGEIAASCGSFVGSFKASCIRSLESCRFDKVKPVRDIVLQTLQYWNNIQGPDTPEPSEAGSSIKENLCGGDFSDVTSSMEHGKKDAAIRKVGVGSTRGRIPLNMRKTCPSYLENTQHFKANDCHIEIAVPQKRNQSLSGFHTEESEGSTVTKTFQGVSTDVTDIQDVEYDYVRMDDRQDCSSVSSFLPGREFGMVCRESLEDSSVHKSTDRSKRFVNEGVCSEEQMYSTPVMDRRSLESVVTESSCRIVQECDSEVANDMVCIRKHLLEIENKQSNLMYLFKEFTSGVMDSLSVIQSRVVGLEHVVYGLSQDLLNGNRPADHSNSKFMKQNQSLNSPRLSTCTPRSSVDIPSRQSSLSSLKHSSIWDENVAVRSRSSNATKHGTDIWRKANPVKKPPEKDLQKYCGEAIQNSSSRHLGKTNTVFSSFPSANVRQVSDGKNSISRRVSGFLRQGDVDAAYMEALGSGDEVVLFELLDQTGPVLECLSTKTISNILRILASFLPERRFIRCIIPWLQQVVELSTIHGANSLGLSAKERQEFALAIQEASKSELSNPAETRLVTQLATKLAMLVMARRQISMARPCFQRFLYWISVQNQWKLRKAPHVTMEDFLISLLILFLSFISLTLFVLFYKHKSLFSYPNTPPGAIGLPIIGESLEFLSTGWKGEPEKFIFDRLNKYKSDIFKTSIVGVPAAIFCGPVCNKFLFSNENKLVTSWWPDSVNKIFPASTEINSKESAIRLKKLLPRFLKPEALQRYIGVMDELAQRHFASSWENREHVLVFPLAKSFTFSLACRLFLSLEDRIHVERLSEPFQNIAAGIISMPIDLPGTPFNRAIKASNFVRKELLSIVRQRKSDLAEGKASPTQDILSHMLLTCDEIGQYMNESAIADNILGLLIGGHDTASAACTFIVKYLAELPQIYDRVYREQMEIAKAKAKAKGELLKWEDIQKMKYSWNVACEVLRLASPLQGAFREAINDFVFNGFNIPKGWKLYWSSNSTHKNHAYFPEPYKFDPSRFEGNGPAPYTFVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWTKLLEKEKIIVDPLPIPEKGLPVRLFPHKTLSL 1344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4141943 4153665 - CmaCh10G008550.1 Cma10g00855 302171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00855 1344 SMART TOG_3 47 290 IPR034085 -
Cma10g00855 1344 Gene3D Cytochrome P450 886 1338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 Pfam Cytochrome P450 896 1317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 PANTHER TORTIFOLIA1-LIKE PROTEIN 2 5 825 - -
Cma10g00855 1344 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1281 1290 IPR017972 GO:0005506|GO:0016705
Cma10g00855 1344 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 5 825 IPR033337 GO:0005874|GO:0008017
Cma10g00855 1344 Gene3D - 48 298 IPR011989 -
Cma10g00855 1344 PRINTS E-class P450 group I signature 1278 1288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 PRINTS E-class P450 group I signature 1138 1155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 PRINTS E-class P450 group I signature 1246 1270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 PRINTS E-class P450 group I signature 1288 1311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 Pfam HEAT repeat 108 134 IPR000357 GO:0005515
Cma10g00855 1344 SUPERFAMILY Cytochrome P450 889 1338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00855 1344 SUPERFAMILY ARM repeat 24 301 IPR016024 -
Cma10g00855 1344 MobiDBLite consensus disorder prediction 571 607 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00942 Cma-Chr9:4725304 Cma10g00855 Cma-Chr10:4141943 1.52E-13 dispersed
Cma10g00855 Cma-Chr10:4141943 Cma01g00618 Cma-Chr1:3222113 6.39E-71 dispersed
Cma12g00708 Cma-Chr12:3912688 Cma10g00855 Cma-Chr10:4141943 5.34E-65 dispersed
Cma09g00945 Cma-Chr9:4754604 Cma10g00855 Cma-Chr10:4141943 1.17E-90 transposed
Cma10g00341 Cma-Chr10:1591637 Cma10g00855 Cma-Chr10:4141943 3.58E-80 transposed
Cma10g00342 Cma-Chr10:1593680 Cma10g00855 Cma-Chr10:4141943 6.17E-42 transposed
Cma19g01066 Cma-Chr19:8953994 Cma10g00855 Cma-Chr10:4141943 4.35E-82 transposed
Cma10g00855 Cma-Chr10:4141943 Cma11g00914 Cma-Chr11:4740070 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00855 - - csv:101205801 1436.78