Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g00901 | ATGCATTCATCCACCGTGAGAGCAGCAAGAGAAAGAGAGCTAGCCATGGATGCCTTCTTTGTGCTTCTATTCATGCCTTTCATTTTTGTTATGTTCTCTCATTGTTATTACCGCAAAACAAAGCATTCAAATGGGGAAGCACCTGAGCTCCCACCTGGCCCTAAGCCATGGCCTCTTGTGGGCTGCCTCCCAACAATGTTGCCCACCAACTTGCCAGCCTACCAATGGATCCATGCAGTAATGAAGCAATTCAACACCGAAATTGCTTGCATACGTCTTGGAAGTACTTACATAATCCCTGTGGCTTCTCCACAGCTCGCTCTTGAGTTTCTTAAAACACATGATTCTATCTTTGCATCACGTTCCAACATTTCGAACACGGTCAATATTCTAAACGGCCACCATATTTGCACCTTTTGGAGAACAATGGAGGAAGATGAGAAGAATTCTTGCATCAGAGATACCCAATCCATCAACTCAGAATGCTTGGCCATAGAAACACCGAGGCTGATACTCTTTTACGCTATATTTTCAGCCAAACAAGTAATAGAGGTGGAGCGGTGTGGAATGGGTAATGGTAGAGTTAGTGAAGAATTAGACAAAGTAGTTGGAAGAGAAAGGATTGTTGAAGAATATGATATCCCAAATCTCAAGTTCCTCACCGCTTGTATTAGAGAATCATTTCGCCTTCATCCATTTTCGCCTTTCAACGTTCCTCATGTCTCAAACACTGACATCATAGTGGCTGGTTACTTCATCCCAAAAGGTAGTGAAGTGTTGCTTAGCCGTATAGGTCTTGGCCGAAACCCAAGGATTTGGGAGGATCCAATGAAGTTTAATCCAGAGCGTCACCTGAATGATAGTACAACGGAATCGGGACTATTAGAACCTGACCTACGATTCGTCACCTTCAGTAGAGGGAGAAGAGGGTGCATTGGTAGCACACTTGGCACTAACATTACATTGATGCTCTTTGCAAGACTTCTACAAGGCTTTTCATGGAGCTTGCTATCAGGAATGACAAAGATAGACTTCTCCGAAGCCGATGAACTCTCCCTCCCAAAGCCATTGCATCTGCATGCAAAGCCACGCTTAGAGCCACGCTTATCTCACGATATGTACCCTGGGCGTATTCATCACCAAGTGTAA | 1149 | 44.39 | MHSSTVRAARERELAMDAFFVLLFMPFIFVMFSHCYYRKTKHSNGEAPELPPGPKPWPLVGCLPTMLPTNLPAYQWIHAVMKQFNTEIACIRLGSTYIIPVASPQLALEFLKTHDSIFASRSNISNTVNILNGHHICTFWRTMEEDEKNSCIRDTQSINSECLAIETPRLILFYAIFSAKQVIEVERCGMGNGRVSEELDKVVGRERIVEEYDIPNLKFLTACIRESFRLHPFSPFNVPHVSNTDIIVAGYFIPKGSEVLLSRIGLGRNPRIWEDPMKFNPERHLNDSTTESGLLEPDLRFVTFSRGRRGCIGSTLGTNITLMLFARLLQGFSWSLLSGMTKIDFSEADELSLPKPLHLHAKPRLEPRLSHDMYPGRIHHQV | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4481739 | 4483717 | - | CmaCh10G009010.1 | Cma10g00901 | 302217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g00901 | 382 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 194 | 369 | - | - | |
Cma10g00901 | 382 | Pfam | Cytochrome P450 | 194 | 357 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 304 | 313 | IPR017972 | GO:0005506|GO:0016705 | |
Cma10g00901 | 382 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 27 | 125 | - | - | |
Cma10g00901 | 382 | SUPERFAMILY | Cytochrome P450 | 51 | 139 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 194 | 369 | - | - | |
Cma10g00901 | 382 | Gene3D | Cytochrome P450 | 173 | 367 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | PANTHER | PHENYLALANINE N-MONOOXYGENASE | 27 | 125 | - | - | |
Cma10g00901 | 382 | SUPERFAMILY | Cytochrome P450 | 194 | 364 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | Gene3D | Cytochrome P450 | 35 | 146 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | PRINTS | E-class P450 group IV signature | 217 | 233 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | PRINTS | E-class P450 group IV signature | 251 | 265 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma10g00901 | 382 | PRINTS | E-class P450 group IV signature | 267 | 285 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00901 | Cma-Chr10:4481739 | Cma14g01195 | Cma-Chr14:9549364 | 9.79E-08 | dispersed | |
Cma10g00900 | Cma-Chr10:4478482 | Cma10g00901 | Cma-Chr10:4481739 | 9.63E-63 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g00901 | - | K12153 | cpep:111780516 | 340.117 |