Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00901 ATGCATTCATCCACCGTGAGAGCAGCAAGAGAAAGAGAGCTAGCCATGGATGCCTTCTTTGTGCTTCTATTCATGCCTTTCATTTTTGTTATGTTCTCTCATTGTTATTACCGCAAAACAAAGCATTCAAATGGGGAAGCACCTGAGCTCCCACCTGGCCCTAAGCCATGGCCTCTTGTGGGCTGCCTCCCAACAATGTTGCCCACCAACTTGCCAGCCTACCAATGGATCCATGCAGTAATGAAGCAATTCAACACCGAAATTGCTTGCATACGTCTTGGAAGTACTTACATAATCCCTGTGGCTTCTCCACAGCTCGCTCTTGAGTTTCTTAAAACACATGATTCTATCTTTGCATCACGTTCCAACATTTCGAACACGGTCAATATTCTAAACGGCCACCATATTTGCACCTTTTGGAGAACAATGGAGGAAGATGAGAAGAATTCTTGCATCAGAGATACCCAATCCATCAACTCAGAATGCTTGGCCATAGAAACACCGAGGCTGATACTCTTTTACGCTATATTTTCAGCCAAACAAGTAATAGAGGTGGAGCGGTGTGGAATGGGTAATGGTAGAGTTAGTGAAGAATTAGACAAAGTAGTTGGAAGAGAAAGGATTGTTGAAGAATATGATATCCCAAATCTCAAGTTCCTCACCGCTTGTATTAGAGAATCATTTCGCCTTCATCCATTTTCGCCTTTCAACGTTCCTCATGTCTCAAACACTGACATCATAGTGGCTGGTTACTTCATCCCAAAAGGTAGTGAAGTGTTGCTTAGCCGTATAGGTCTTGGCCGAAACCCAAGGATTTGGGAGGATCCAATGAAGTTTAATCCAGAGCGTCACCTGAATGATAGTACAACGGAATCGGGACTATTAGAACCTGACCTACGATTCGTCACCTTCAGTAGAGGGAGAAGAGGGTGCATTGGTAGCACACTTGGCACTAACATTACATTGATGCTCTTTGCAAGACTTCTACAAGGCTTTTCATGGAGCTTGCTATCAGGAATGACAAAGATAGACTTCTCCGAAGCCGATGAACTCTCCCTCCCAAAGCCATTGCATCTGCATGCAAAGCCACGCTTAGAGCCACGCTTATCTCACGATATGTACCCTGGGCGTATTCATCACCAAGTGTAA 1149 44.39 MHSSTVRAARERELAMDAFFVLLFMPFIFVMFSHCYYRKTKHSNGEAPELPPGPKPWPLVGCLPTMLPTNLPAYQWIHAVMKQFNTEIACIRLGSTYIIPVASPQLALEFLKTHDSIFASRSNISNTVNILNGHHICTFWRTMEEDEKNSCIRDTQSINSECLAIETPRLILFYAIFSAKQVIEVERCGMGNGRVSEELDKVVGRERIVEEYDIPNLKFLTACIRESFRLHPFSPFNVPHVSNTDIIVAGYFIPKGSEVLLSRIGLGRNPRIWEDPMKFNPERHLNDSTTESGLLEPDLRFVTFSRGRRGCIGSTLGTNITLMLFARLLQGFSWSLLSGMTKIDFSEADELSLPKPLHLHAKPRLEPRLSHDMYPGRIHHQV 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4481739 4483717 - CmaCh10G009010.1 Cma10g00901 302217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00901 382 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 194 369 - -
Cma10g00901 382 Pfam Cytochrome P450 194 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 304 313 IPR017972 GO:0005506|GO:0016705
Cma10g00901 382 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 27 125 - -
Cma10g00901 382 SUPERFAMILY Cytochrome P450 51 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 PANTHER PHENYLALANINE N-MONOOXYGENASE 194 369 - -
Cma10g00901 382 Gene3D Cytochrome P450 173 367 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 PANTHER PHENYLALANINE N-MONOOXYGENASE 27 125 - -
Cma10g00901 382 SUPERFAMILY Cytochrome P450 194 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 Gene3D Cytochrome P450 35 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 PRINTS E-class P450 group IV signature 217 233 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 PRINTS E-class P450 group IV signature 251 265 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma10g00901 382 PRINTS E-class P450 group IV signature 267 285 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00901 Cma-Chr10:4481739 Cma14g01195 Cma-Chr14:9549364 9.79E-08 dispersed
Cma10g00900 Cma-Chr10:4478482 Cma10g00901 Cma-Chr10:4481739 9.63E-63 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00901 - K12153 cpep:111780516 340.117