Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g00964 ATGAGGCCTGTCAAACGCGAACCCGCCTCCAGCAGCCGCAATAATCGGAGTAGAGGCGGCTCCGTTGCTGTCGATGCTGCGAGTTTAAGGGACGTTAAGCGGGAGAGGGTAGCTTGGGAGCGAGAGAAGTCCGGCGTGGACAATACGACTGTAGAAGAAGAGGGTCAGCAAGAGTTGTCGAAGCGGCGGGTTCTTCGCTCTCGGTACCTTGCTGTTATTCATGAGATTAGCGAACGAAGAGAGGACTTGTCGAAGGATTTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCATAAGCCAAGGGAACAAGTTGCAGATGCAGAGGCGTTGCAAGATATTGCAAGCTCCCTCGTGACCTCTATTATGTCTCAGTCGAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTTCTCAGAGAGTTTGCTGACATTAACGGTAATATAACATGTGAAGAAAACAACCTGGTTTCTGTTAGTTGGAAAGATATTGGACTCGGTGTTTCCTCTATTTTCATGAATTGCCATGGATGCCGCACCATGCTAGGACCTATGAGCAATCAGTTGAAGCAGCGAAAAACTACTAATATTTCCAGGAAACGTTCCCGACCCACTGAAAGTTATAGACCTGCAGAGGTTGAAGATAATGGATCTGAAGAAAAAACAGATACAGATAAGAACATGGGTATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTCGAGCATTTGATATTGAATAGAAAGTCTTTTGCTCAGACAGTAGAGAATTTATTTGCTCTATCCTTTCTAGTTAAGGATGGTCGGGCTGCGATAACTATTGATAAAAATGGTTCTCATTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTGCCATTATGTCACATGAAGTTAATTACAGTCATTTTATATTCAGATTCGATTTCATGGATTGGAAGCCGATGGTGGATATGGTACCAGTTGGAGATGAGCTGATGCCACACAGGAACATTCTGAACTCAGCGCAGGTGCCTCAAGCAGAAGCATCAACGGACGATTCTGAAGCAGCAGCATTGCCTACTACACCAATCCGAAAGCTGTCGCGAAATCGAGGTTTAGTTATGCAATCTGTTGTTGAAGATTCTCCTGATAATGGCGCTCATTCAGGAGCAACTGCAATCTTGAGGTGTAAGAGAAAGCTTAGTCAAGGTATGGTTAACTAG 1230 44.15 MRPVKREPASSSRNNRSRGGSVAVDAASLRDVKRERVAWEREKSGVDNTTVEEEGQQELSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVHKPREQVADAEALQDIASSLVTSIMSQSNEGVTPSDFVSCLLREFADINGNITCEENNLVSVSWKDIGLGVSSIFMNCHGCRTMLGPMSNQLKQRKTTNISRKRSRPTESYRPAEVEDNGSEEKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAAITIDKNGSHFVSPKNAPAHSAIMSHEVNYSHFIFRFDFMDWKPMVDMVPVGDELMPHRNILNSAQVPQAEASTDDSEAAALPTTPIRKLSRNRGLVMQSVVEDSPDNGAHSGATAILRCKRKLSQGMVN 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4916574 4919660 + CmaCh10G009640.1 Cma10g00964 302280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g00964 409 MobiDBLite consensus disorder prediction 1 27 - -
Cma10g00964 409 Pfam Nse4 C-terminal 248 334 IPR014854 -
Cma10g00964 409 MobiDBLite consensus disorder prediction 193 231 - -
Cma10g00964 409 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 42 403 - -
Cma10g00964 409 MobiDBLite consensus disorder prediction 206 231 - -
Cma10g00964 409 PANTHER UNCHARACTERIZED 42 403 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g00964 Cma11g00828 CCT
Cma10g00964 Cma11g00828 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00964 Cma-Chr10:4916574 Cma11g00828 Cma-Chr11:4150177 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g00964 K22825 - csv:101220149 670.618