Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g00979 | ATGGCCGCCGCCGATACCGCCGACGAGTCGTTGGACCGCCGTCGTGATCAACAAGAGAAATCGTCTGAGGAGCAACCTCATTCCTCGCCTCCGCCGCAGTTGGCTGCTGCTGCTCCTCCTCCTCCTTCCAGAAGAAGGGATAGAGATGAGAGAGATAGGAGAGACGACCGGGATGTTGATCGTCCTCCGAACCGACGCAACGATAATTACGATCGTAATCGCTCTCCGCCTACGCTGCCTCCGAGGGATAGGGATAGAGACAGAGATAGGGATTATAAACGGCGGAACAGTCTTAGTCCCCCACCGCCTTACAGGGATCGTAGACACTCGCCTCCTAGACGGTCTCCGCCACCTTTCAAGCGTTCCCGGAGAGATGATGGGGGTGGGTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATTATGGTGGGGGATATGAGCGCGAACTGCGAGGCCGGCCTGGATATGTTGATGAAAGGTCTCTTGGTCGGTACATTGGTCGTTCATCTGGTGGCTATCAAGGTGATTGGGATTCTAGTCGTGGTGGGCATGGTGATCCACTCAATGCAGGAGCTGGCCAAAGAGAAGGTTTGATGACATACAAGCAATTTATTCAAGAGCTTGAGGATGATATACTGCCTGCAGAAGCTGAGCCCAGATATCAAGAATACAAGTCTGAGTATATTACAACACAGAAACAATCCTTTTTTGATTCTCATAAGGATGAAGAATGGTTGAAAGACAAATATCATCCTACCAACCTAGTTACTGTCATTGAAAGGAGGAATGAACTTGCACAAAGAACTGCTAAGGATTTTTTGATTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGACTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGGAGGCGTCATGGTAGAGGACCAGCAAAAGAAATGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGCTCTGAACCAAGAAGAATCCAAATTGACATTGAACAAGCTCAATCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTATGTGGTTCTGATAGTGACAAACTAGGTCGGGATAAAGCACATGGCGGCTCTTCTGGCCCAGTCATTATCATACGAGGGTTGACAACCGTTAAAGGCTTAGAGGGTGTTGAACTATTAGACACACTTCTCACATATCTGTGGCGCATCCATGGCTTAGATTACTATGGAATGGTTGAGACTAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGAAAGAACTCTAACATGGCTGGTGGTGCAGATGAATGGGAGAAGAAACTTGATTCGCGTTGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAACGATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGTAAGATAAGAGATGAGAAATATGGATGGAAGTATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCTCCTGAGTTTGTGCACAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACGCCTGTTATGCAACAATCGCTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGCTCGGCTGAAGGATGACAGAGGCAATCGCAGGGACCGTGATAATTGGGCGAATGGGGGTGACAGATTTGATAGATCTGAGAATCCACAATCAAATGATTTCCAATCAGCAAATGATGGTTCGGATGGTGGAAACCTTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGGCATGTTGCTCCTTTTGCCTCTGAAATGCCACCACCTGTGCTTATGCCTGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCACCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCATTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATTCTTGCCCTATCTCCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGATGCCCCTGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTATATATTTGGTATCGGCGAGTGTTTAGAGGCCTGCTCGTGTTTCCAAGGGGGGATGCAACTCCGGAACTG | 2319 | 47.3 | MAAADTADESLDRRRDQQEKSSEEQPHSSPPPQLAAAAPPPPSRRRDRDERDRRDDRDVDRPPNRRNDNYDRNRSPPTLPPRDRDRDRDRDYKRRNSLSPPPPYRDRRHSPPRRSPPPFKRSRRDDGGGYDGRKGSPRGGFGPGDRRFGYDYGGGYERELRGRPGYVDERSLGRYIGRSSGGYQGDWDSSRGGHGDPLNAGAGQREGLMTYKQFIQELEDDILPAEAEPRYQEYKSEYITTQKQSFFDSHKDEEWLKDKYHPTNLVTVIERRNELAQRTAKDFLIDLQSGTLELGPGINAAATNKSGQTSEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIEQAQSLVRKLDSEKGIEENILCGSDSDKLGRDKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDSRWQERLRGQDPLETMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDARLKDDRGNRRDRDNWANGGDRFDRSENPQSNDFQSANDGSDGGNLDDPMFDTFGGQGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSPGFRQDPRRIRSYQDLDAPEDEVTVIDYRSLYIWYRRVFRGLLVFPRGDATPEL | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5064998 | 5072086 | + | CmaCh10G009790.1 | Cma10g00979 | 302295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 1 | 202 | - | - | |
Cma10g00979 | 773 | PANTHER | SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN | 43 | 750 | - | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 7 | 23 | - | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 316 | 333 | - | - | |
Cma10g00979 | 773 | PANTHER | ARSENITE-RESISTANCE PROTEIN 2 | 43 | 750 | IPR039727 | GO:0006397 | |
Cma10g00979 | 773 | Pfam | SERRATE/Ars2, N-terminal domain | 212 | 293 | IPR021933 | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 579 | 611 | - | - | |
Cma10g00979 | 773 | Pfam | Arsenite-resistance protein 2 | 451 | 653 | IPR007042 | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 42 | 132 | - | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 562 | 645 | - | - | |
Cma10g00979 | 773 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 517 | 540 | IPR013087 | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 151 | 168 | - | - | |
Cma10g00979 | 773 | MobiDBLite | consensus disorder prediction | 296 | 354 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g00979 | Cma11g00810 | CCT | |
Cma10g00979 | Cma11g00810 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g00979 | Cma-Chr10:5064998 | Cma11g00810 | Cma-Chr11:3953212 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g00979 | - | - | cmax:111485005 | 1231.47 |