Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g01011 ATGTCCAATCCAAAAGTGTTCTTCGACATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTTATGGAGCTGTTTGCAGACACAACGCCAAAAACTGCAGAGAATTTCCGAGCCCTCTGCACCGGAGAGAAGGGGATGGGAAGATCAGGGAAGCTATTGCACTACAAAGGCTCAACATTCCACCGTATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCTATCTATGGCTTGAAATTTGCAGATGAGAACTTCAAGATGAAACACACCGGACCCGGAGTCCTTTCGATGGCGAATGCGGGACCGAACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTAAAGGCGATGGAGAATGTGGGTTCAGACAGTGGGAGTACTAAGCAAACAGTTGTGATTGAGGACTGTGGGCAGGTAGCTGAGAGTTGA 525 47.24 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTFHRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVAES 174
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5308774 5309298 - CmaCh10G010110.1 Cma10g01011 302327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma10g01011 174 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Cma10g01011 174 PIRSF Peptidylpro_ismrse 1 174 IPR024936 GO:0003755
Cma10g01011 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 2 173 - -
Cma10g01011 174 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 170 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 CDD cyclophilin_ABH_like 4 169 - -
Cma10g01011 174 SUPERFAMILY Cyclophilin-like 2 171 IPR029000 -
Cma10g01011 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 Gene3D - 1 174 IPR029000 -
Cma10g01011 174 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 169 IPR002130 GO:0000413|GO:0003755
Cma10g01011 174 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 173 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cma10g01011 Cma20g00305 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g01011 Cma-Chr10:5308774 Cma19g00725 Cma-Chr19:7323413 7.38E-101 dispersed
Cma10g01011 Cma-Chr10:5308774 Cma11g00980 Cma-Chr11:5215091 6.35E-31 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g01011 K01802 - egr:104432526 330.102