Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g01011 | ATGTCCAATCCAAAAGTGTTCTTCGACATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTTATGGAGCTGTTTGCAGACACAACGCCAAAAACTGCAGAGAATTTCCGAGCCCTCTGCACCGGAGAGAAGGGGATGGGAAGATCAGGGAAGCTATTGCACTACAAAGGCTCAACATTCCACCGTATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAATCTATCTATGGCTTGAAATTTGCAGATGAGAACTTCAAGATGAAACACACCGGACCCGGAGTCCTTTCGATGGCGAATGCGGGACCGAACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTAAAGGCGATGGAGAATGTGGGTTCAGACAGTGGGAGTACTAAGCAAACAGTTGTGATTGAGGACTGTGGGCAGGTAGCTGAGAGTTGA | 525 | 47.24 | MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTFHRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVAES | 174 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5308774 | 5309298 | - | CmaCh10G010110.1 | Cma10g01011 | 302327 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g01011 | 174 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 55 | 72 | IPR020892 | GO:0003755|GO:0006457 | |
Cma10g01011 | 174 | PIRSF | Peptidylpro_ismrse | 1 | 174 | IPR024936 | GO:0003755 | |
Cma10g01011 | 174 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 | 2 | 173 | - | - | |
Cma10g01011 | 174 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 7 | 170 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | CDD | cyclophilin_ABH_like | 4 | 169 | - | - | |
Cma10g01011 | 174 | SUPERFAMILY | Cyclophilin-like | 2 | 171 | IPR029000 | - | |
Cma10g01011 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 24 | 39 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 60 | 72 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 103 | 118 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 118 | 130 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 131 | 146 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | Gene3D | - | 1 | 174 | IPR029000 | - | |
Cma10g01011 | 174 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 14 | 169 | IPR002130 | GO:0000413|GO:0003755 | |
Cma10g01011 | 174 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 2 | 173 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g01011 | Cma20g00305 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g01011 | Cma-Chr10:5308774 | Cma19g00725 | Cma-Chr19:7323413 | 7.38E-101 | dispersed | |
Cma10g01011 | Cma-Chr10:5308774 | Cma11g00980 | Cma-Chr11:5215091 | 6.35E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g01011 | K01802 | - | egr:104432526 | 330.102 |