Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g01074 ATGGCAATTTCCCTCTCCTTTCTCAAATCCTCTGCTCTCTCTCTCACCATTCTCTCTGTTTTCATCTTCTTCCTCCTCTTCACTCCAAATCACTCGCCGGAATCCTCGTCCAGAAGGTCCTTAATCGCTGCCGGCGACTCCAATTCCAATGCATCTTCGATCCCATATTGTTCCTCTCGTGAATCTCACTTCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTCCTTCGATCGAAACCCATTTCTCTCTGTCCCGTTTCTTATTCTCATTCTTCTCCTCTACTTCTACATCCTCATCAAAACCGCTCAGGATCACTTTTCCATTGTCACTTCCAAGCTCGCTTTTCACCTCAATTTGTCTCCGAGTATGGCTGCTGTGACGCTCTTGGCTTTGGGAAATGGCGCTCCTGATGTGTTTGCATCTGTTGCGGCGGTTCGTGGTGGGCATTATCGAACTGGATTCGGTGCAATTCTCTCTGCCGGCACGTTTGTTTCGGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCACAGTTTGTGAGGGATGTGTTGTTTTATTTGACCGCAGCGTTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCCTGTGGCAAGCTGTTGGGTTTGTTGGATTCTATCTGTTCTTTGTTGGGCTGGTGTTTTGGATGGATTTGGGGAATGGGAAAGCTAAGAGTGGGGCTGATATGGGAGTGGCTAGAGAAGCTGAGGGTGAGTTGCCTCAAGACTGTGAGATGGGAGAAGGCTACAGACATGTAGATGAAGGAAAAACCAATTCTGGCTTATGGGAAGCTCTTCGAATGATCCCGAAAGCATGGGAGGCTCCGGTCGTGTTTCTTCTGAAGCTCACCATTCCCCAACCCGCACCTTCTGAATGGAGCAGATTCTTTACCTCAGCCAATATTTCTCTGTGTCCCATTGCTCTTCTGTATGCCTGTAACTCATTCATGTCTTTTAACCATCCCATTGCTTTCCTCTTACCGAATACGCATTTACCTCTTTGGTTCGTAGTACTCTTAGCAAGCTCCTCTCTCGCAATTCTGCACTTCGTCACAGAAACCGAGCCCCCGAAAACTGAGAAAGTCCCTGTTGTGCTTGCAGCATTTGTTATGAGTGTATTTTGGATTTCGACCACCGCTGGTGAACTTCTGAACTGTCTTGCAGCTCTTGGAGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAACTCGGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCTTTGCTGGCTATGGCTGGATGCTTTGCAGGACCGATGTTTAACATGCTTGTCGGGCTCGGAACAGCATTGGTTATACAAACAGCTAACAATTATCCAGAGGCCTATCAGCTTCAATTCCATATCGGAATAGTGATTGCGTTCGTATTCCTACTTTTCAGCTTGATGGGTTCCCTGCTTGTAGTTATTTGGTGCAGATTTCGGGTGCCCCGGTTTTGGGGATTCTGCCTTGTTGTGCTCTACATTGTTTTCATGGCTACCAGTTTACTGATGGCCGAGTATTCTCCGTGA 1617 47.5 MAISLSFLKSSALSLTILSVFIFFLLFTPNHSPESSSRRSLIAAGDSNSNASSIPYCSSRESHFDGLVNYLYFHFCSFDRNPFLSVPFLILILLLYFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGHYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLGNGKAKSGADMGVAREAEGELPQDCEMGEGYRHVDEGKTNSGLWEALRMIPKAWEAPVVFLLKLTIPQPAPSEWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVLLASSSLAILHFVTETEPPKTEKVPVVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANNYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVVIWCRFRVPRFWGFCLVVLYIVFMATSLLMAEYSP 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6889686 6895142 + CmaCh10G010740.1 Cma10g01074 302390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g01074 538 Pfam Sodium/calcium exchanger protein 382 531 IPR004837 GO:0016021|GO:0055085
Cma10g01074 538 Pfam Sodium/calcium exchanger protein 91 231 IPR004837 GO:0016021|GO:0055085
Cma10g01074 538 Gene3D - 313 531 IPR044880 -
Cma10g01074 538 Gene3D - 121 243 IPR044880 -
Cma10g01074 538 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 282 534 - -
Cma10g01074 538 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 11 240 - -
Cma10g01074 538 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 11 240 - -
Cma10g01074 538 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 282 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g01074 Cma-Chr10:6889686 Cma11g00740 Cma-Chr11:3607174 1.97E-15 dispersed
Cma10g01074 Cma-Chr10:6889686 Cma14g00536 Cma-Chr14:2658867 6.20E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g01074 K13754 - csv:101209909 894.419