Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g01092 | ATGACACCCATTTTGAACTATGTTGTGTCCAAATGGCAAGCGTTGTCCACTTCTGATCATGCCTCTGTGGTTTCCATCAACTTATTTGTGGCACTTCTCTGTGCTTGTATTGTGATTGGTCATCTTCTTGAGGAGACCCGATGGATGAATGAGTCGATCACTGCACTCTTGATTGGTATGTTTGCTGGAATAGTCATTTTACTGGTCAGTCGTGGGAAAAGTTCGCATTTGTTGCTTTTCAGCGAAGATACATTCTTTATTTATCTTCTACCACCGATTATATTCAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTCAACTTTATGACAATTATGCTGTTTGGTGCAATTGGTACATTAGTCTCGTGTTTCATCATCTCGTTAGGAGCTTTTCAGTTCTTTAAGAAAATGGATGTTGGATCACTGGACATTGCTGATATTTTAGCGATTGGAGCTATATTTGCTGCAACGGATTCTGTATGCACGCTTCAGATATTAAGCCAGGACGAAACCCCTCTACTCTACAGTCTCGTATTTGGGGAAGGCGTGGTCAATGACGCTACGTCTGTGGTGCTTTTCAATGCTATTCAAAGCATAGATCTCAGCAACATTGATGCAAGAGTTGCTATACATTTTCTTGGGAGCTTCTTTTATCTGTTTTCGACGAGCACTCTACTTGGAGTGTTTGTTGGGCTGCTGAGTGCTTATATAATCAGAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTCGCTCTTATGATACTCATGGCGTATCTTTCGTATATGCTGGCTGAATTACTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACATTATACCTGGCATAATGTGACTGAGAGCTCAAGAGTTACCACCAAACACGCGTTTGCTACCTTATCCTTCATTTCCGAGTCATTTATCTTTGTTTATGTTGGCATGGATGCATTAGACATCGAGAAGTGGAGCTTTGTTAGTGATAGTCCGGGGACATCGGTTGCTGTGAGTGCAATGTTACTCGGCCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCGTTTTTATCCAACTTAGCTAAAAAATCAGCAGATGAGAAAATTACTTTCAGGGAACAAGTTATCATTTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCCATTGCTCTAGCTTATCACCAGTTCACCAGAGCAGGGCACACTCAACTACGAGGGAATGCAATGATGATCACTAGTACCGTAACCGTTGTCCTCTTCAGCACGATGGTGTTTGGATTATTGACCAAACCTCTTATTAAGTGTTTGATACCCCACCCGAAACTCACGACCAGCATGCTATCGGACCCTGCGACTCCAAAATCATTCTCGGTTCCGCTACTTGGAAGCGCACAAGATTCAGAGCTGGATCTTGACAATCTCCATGTTTCTCGTCCAACGAGTATACGCGCATTCCTTGCAACTCCTACGCACACTGTGCATCGGTACTGGCGAAAGTTCGACGACGCCTTCATGCGTCCAATGTTTGGGGGTCGGGGGTTTGTTCCTTTTGTCCCAGGATCGCCAACCGAAAGGGGAGGGCATTGA | 1614 | 43.87 | MTPILNYVVSKWQALSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALLIGMFAGIVILLVSRGKSSHLLLFSEDTFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLVSCFIISLGAFQFFKKMDVGSLDIADILAIGAIFAATDSVCTLQILSQDETPLLYSLVFGEGVVNDATSVVLFNAIQSIDLSNIDARVAIHFLGSFFYLFSTSTLLGVFVGLLSAYIIRKLYFGRHSTDREVALMILMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISESFIFVYVGMDALDIEKWSFVSDSPGTSVAVSAMLLGLVMVGRAAFVFPLSFLSNLAKKSADEKITFREQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAMMITSTVTVVLFSTMVFGLLTKPLIKCLIPHPKLTTSMLSDPATPKSFSVPLLGSAQDSELDLDNLHVSRPTSIRAFLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGGH | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7256436 | 7263128 | + | CmaCh10G010920.1 | Cma10g01092 | 302408 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g01092 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 536 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cma10g01092 | 537 | TIGRFAM | b_cpa1: sodium/hydrogen exchanger 3 | 24 | 445 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | PRINTS | Na+/H+ exchanger signature | 153 | 163 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 536 | - | - | |
Cma10g01092 | 537 | Pfam | Sodium/hydrogen exchanger family | 29 | 443 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cma10g01092 | 537 | Gene3D | - | 145 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g01101 | Cma-Chr1:8073976 | Cma10g01092 | Cma-Chr10:7256436 | 0 | dispersed | |
Cma10g01092 | Cma-Chr10:7256436 | Cma11g01251 | Cma-Chr11:8327881 | 0 | dispersed | |
Cma10g01092 | Cma-Chr10:7256436 | Cma08g01201 | Cma-Chr8:7385483 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g01092 | - | - | csv:101214934 | 959.133 |