Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g01110 | ATGATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTGAATACCTGGGTTCTCATTTCCAACTTCAAGTTGGCTTATAATCTTCTTCGTCGGCCTGATGGGACCTTCAATCGCCATTTGGCTGAGTTTCTCGACCGGAAAGTCCCTGCAAATGCTAACCCTGTTGATGGGGCTTTCTCGTTTGATGTCATTATTGATCGTGCTATGAGCCTGCTTTGTCGAATTTATCGACCTGCCAACGGAGGGGAGCCTCAGACTACTAGCATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCTCATTCGTCTGCTAATAGCGCTATCTACGATACGCTATGTCGTCGATTGGTTAGCCTTTGCAAGGCTGTTGTTATCTCTGTGAATTATAGGCGTGCTCCTGAAAATCGATATCCATGTGCTTATGATGATGGATGGACTGCACTCAATTGGGTGAACTCAAGAACATGGCTTCGAAGTAAAGACTCGAAAAGCTATATCTATTTGGCTGGCGATAGTTCGGGTGGAAACATTGTACACCATGTTGCATCAAGAGCTGTGAAGTTGGGAATCGAAGTGTTCGGTAATATACTTCTTAATCCAATGTTTGGGGGACAGGAAAGAACCAAATCAGAGATTCGGTTGGATGGGAAGTATTTTGTGACCATTCGAGATAGAGATTGGTATTGGAGGGCCTTTCTCCCTGAGGGAGAAGATAGAGACCATCCAGCTTGTAATCCCTTCGGGCCGAGGGGCTATAGCCTTGAAGGAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAAAGGGCTGGAGAATGATGGCCAGGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGTTACCGAATACCGAGCACTTCTATACTGTCATGGACGAGATAAGCGAATTCGTGAGTTCTGACTGTTAA | 1041 | 45.34 | MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRAMSLLCRIYRPANGGEPQTTSIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVISVNYRRAPENRYPCAYDDGWTALNWVNSRTWLRSKDSKSYIYLAGDSSGGNIVHHVASRAVKLGIEVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7518689 | 7520924 | + | CmaCh10G011100.1 | Cma10g01110 | 302426 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g01110 | 346 | PANTHER | GIBBERELLIN RECEPTOR GID1C | 4 | 342 | - | - | |
Cma10g01110 | 346 | PANTHER | ARYLACETAMIDE DEACETYLASE | 4 | 342 | - | - | |
Cma10g01110 | 346 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 186 | 198 | IPR033140 | - | |
Cma10g01110 | 346 | Gene3D | alpha/beta hydrolase | 1 | 344 | IPR029058 | - | |
Cma10g01110 | 346 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative histidine active site. | 111 | 127 | IPR002168 | GO:0016787 | |
Cma10g01110 | 346 | Pfam | alpha/beta hydrolase fold | 111 | 323 | IPR013094 | GO:0016787 | |
Cma10g01110 | 346 | SUPERFAMILY | alpha/beta-Hydrolases | 61 | 342 | IPR029058 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g01110 | Cma11g01110 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma08g00374 | Cma-Chr8:2163979 | Cma10g01110 | Cma-Chr10:7518689 | 0 | dispersed | |
Cma09g01288 | Cma-Chr9:8886495 | Cma10g01110 | Cma-Chr10:7518689 | 1.76E-69 | dispersed | |
Cma10g01110 | Cma-Chr10:7518689 | Cma17g01144 | Cma-Chr17:7958504 | 0 | dispersed | |
Cma10g01110 | Cma-Chr10:7518689 | Cma11g01110 | Cma-Chr11:6212036 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g01110 | K14493 | - | csv:101213253 | 649.818 |