Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g01110 ATGATGGCTGGAACTAATCAAATCAATCTCAACGAAGCTAGGATGGTGGTTCCACTGAATACCTGGGTTCTCATTTCCAACTTCAAGTTGGCTTATAATCTTCTTCGTCGGCCTGATGGGACCTTCAATCGCCATTTGGCTGAGTTTCTCGACCGGAAAGTCCCTGCAAATGCTAACCCTGTTGATGGGGCTTTCTCGTTTGATGTCATTATTGATCGTGCTATGAGCCTGCTTTGTCGAATTTATCGACCTGCCAACGGAGGGGAGCCTCAGACTACTAGCATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTCCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCTCATTCGTCTGCTAATAGCGCTATCTACGATACGCTATGTCGTCGATTGGTTAGCCTTTGCAAGGCTGTTGTTATCTCTGTGAATTATAGGCGTGCTCCTGAAAATCGATATCCATGTGCTTATGATGATGGATGGACTGCACTCAATTGGGTGAACTCAAGAACATGGCTTCGAAGTAAAGACTCGAAAAGCTATATCTATTTGGCTGGCGATAGTTCGGGTGGAAACATTGTACACCATGTTGCATCAAGAGCTGTGAAGTTGGGAATCGAAGTGTTCGGTAATATACTTCTTAATCCAATGTTTGGGGGACAGGAAAGAACCAAATCAGAGATTCGGTTGGATGGGAAGTATTTTGTGACCATTCGAGATAGAGATTGGTATTGGAGGGCCTTTCTCCCTGAGGGAGAAGATAGAGACCATCCAGCTTGTAATCCCTTCGGGCCGAGGGGCTATAGCCTTGAAGGAATCAAGTTCCCGAAGAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAAAGGGCTGGAGAATGATGGCCAGGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGTTACCGAATACCGAGCACTTCTATACTGTCATGGACGAGATAAGCGAATTCGTGAGTTCTGACTGTTAA 1041 45.34 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGAFSFDVIIDRAMSLLCRIYRPANGGEPQTTSIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVISVNYRRAPENRYPCAYDDGWTALNWVNSRTWLRSKDSKSYIYLAGDSSGGNIVHHVASRAVKLGIEVFGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGYSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLENDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7518689 7520924 + CmaCh10G011100.1 Cma10g01110 302426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g01110 346 PANTHER GIBBERELLIN RECEPTOR GID1C 4 342 - -
Cma10g01110 346 PANTHER ARYLACETAMIDE DEACETYLASE 4 342 - -
Cma10g01110 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cma10g01110 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Cma10g01110 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787
Cma10g01110 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787
Cma10g01110 346 SUPERFAMILY alpha/beta-Hydrolases 61 342 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma10g01110 Cma11g01110 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00374 Cma-Chr8:2163979 Cma10g01110 Cma-Chr10:7518689 0 dispersed
Cma09g01288 Cma-Chr9:8886495 Cma10g01110 Cma-Chr10:7518689 1.76E-69 dispersed
Cma10g01110 Cma-Chr10:7518689 Cma17g01144 Cma-Chr17:7958504 0 dispersed
Cma10g01110 Cma-Chr10:7518689 Cma11g01110 Cma-Chr11:6212036 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g01110 K14493 - csv:101213253 649.818