Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma10g01147 | ATGGCGTCTTTCATAAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCACGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGAGCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGCCAAGCTCAAGCTTTAGAAGAAGCTCTGGATGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAGAAGGGAAAGGATAGATCTGATCGTGAACTTGTAACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGTACAGTTCTTGAGATACTTAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGACGTATAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGAGATCGACCTGACATTTCTACTCCAGAGACTTTGCAGTTGTACCTTGACACTAGATTTGAACAACTGAAAGTTGCCACAGAGCTGGAGCTCTGGCAGGAAGCTTTTCGTTCGGTAGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTGGTTTATTATGTCAAATTAACAGAGATATTCTGGATATCGAAGAGCAATCTTTATCATGCCTATGCTTGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATTTAAGCCAGAAGGATTTGCAGCTGATAGCTTCATCTGTTCTTTTAGCAGCTCTTGCGGTGTCCCCCTATGACTCTAAACACGGTGCCTCTCATTTAGAACTCGAACATGAGAAAGAGCGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGATCGAATCTTCTTTCTGAACTGGTGTCTAAGGGAGTCCTGAGCTGCTCAAATCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTCTTCCCTCTTGATCTTGCAACAAAATTGCAACCTTTACTAAACAAAATATCAAAGCTTGGAGGCAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTGCAATTGTCCCAGTATGTTCCGGCTCTTGAAAAACTTGCTACCCTGAGGTTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCTCAGATGATCCCATTTTTTGATTTCTCGGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATTGTGTTATTTGGAACTTTGGGTATTGAATCAGATGGGCTTCGGGACCACCTGGCTGTTCTTGCTGAATCCTTAAACAAAGCTAGAGCTATGATCTATCCTCCAGTTAGGAAAGTATCAAAAACAGGTGAGATACTGCCTGATTTAGCAGATATTGTTGATAAAGAACACAAGAGGCTGCTTGCTCGGAAATCAATAATAGAGAAAAGGAAGGAAGAGCAGGAACGGCAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGGAGGTTAAAATTACTGAAGATAACTGAAGAGGCTGAGCAGAAGCGCCTAGCTGCAGAATATGAACAAAGGAAAAACCAACGCCTGCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCGCAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAAGAAGGGAAGCAGGAAGCCCGTTCTTGACTCTGAAAAGATGACGAAACAAACTTTAATGCAATTGGCCCTTACGGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTGCAAAAGCTAGCCAAAACTATGGATTATCAAGAAAGGGCAAAAAGAGAGGAGGCTGCAACTTTAATTGAAGCTGCATTTCAGCAACGTTTGCTCGAAGAGCGAATGATTCATGAACGCGATCAACAGCTGGAGGTTGAGTTAAGCAAACAACGTCACGAAGGTGATCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTAATCTTCGCCAAGAGGAGTTCAGCAGACGCAGAGTTGAGAGAGAAGAACAAATCAGGCAAATAATTCATGCTCGGAAAGCAGAAAGAGAGGCTAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAGGAGGAGAGGATTAGAATACTACGCGAAGAGGAGGAAGCACGCAAACGTGAAGAGGCCGAGAGGAGAAAGAGGGAAGAGGCTGAACGCAAGGCTAAATTGGATGAGATTGCCGAGAAGCAGAGACAGAGGGAGCGAGAATTGGAAGAAAAGGAAAGGCGGCGGAAAGAAATGCTGTTTGGTGGTGGGGCACCAGCTGATGCACCTTCTAGACCTTATGTTGCTCCTGTTTCTCAACCTCTGGAGTCCGGGGCTGCTGCTCCTGCTGCTGCCGCCGCCCCAGCCTCAGCCCCAGCGAAGTATGTGCCTTCGTTTCGACGTACTGAAAGCTCTAGCCCTAATGCACCACCACCTGAATCTGATCGATGGGGAAGCAGCAGGTCCGATAATCGACCATCTCAACCAGACAGCTGGCGCCGTGATGAACGCAGATCTGCTTTTGGAAGTTCAAGGTCGTCCTGGTCGTCATCCCGAGGTCCTAATCGTGGTAGCTCGGATCACTGA | 2907 | 43.55 | MASFIKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKTYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDISTPETLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISKSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRSNLLSELVSKGVLSCSNQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVLFGTLGIESDGLRDHLAVLAESLNKARAMIYPPVRKVSKTGEILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKMTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYQERAKREEAATLIEAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVINLRQEEFSRRRVEREEQIRQIIHARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKREEAERKAKLDEIAEKQRQRERELEEKERRRKEMLFGGGAPADAPSRPYVAPVSQPLESGAAAPAAAAAPASAPAKYVPSFRRTESSSPNAPPPESDRWGSSRSDNRPSQPDSWRRDERRSAFGSSRSSWSSSRGPNRGSSDH | 968 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8114322 | 8123289 | - | CmaCh10G011470.1 | Cma10g01147 | 302463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma10g01147 | 968 | MobiDBLite | consensus disorder prediction | 906 | 933 | - | - | |
Cma10g01147 | 968 | Gene3D | UVR domain | 217 | 268 | - | - | |
Cma10g01147 | 968 | MobiDBLite | consensus disorder prediction | 815 | 968 | - | - | |
Cma10g01147 | 968 | MobiDBLite | consensus disorder prediction | 934 | 948 | - | - | |
Cma10g01147 | 968 | Pfam | PCI domain | 373 | 509 | IPR000717 | - | |
Cma10g01147 | 968 | Coils | Coil | 603 | 649 | - | - | |
Cma10g01147 | 968 | ProSiteProfiles | PCI domain profile. | 316 | 513 | IPR000717 | - | |
Cma10g01147 | 968 | Coils | Coil | 799 | 858 | - | - | |
Cma10g01147 | 968 | Coils | Coil | 732 | 752 | - | - | |
Cma10g01147 | 968 | SMART | PINT_4 | 441 | 532 | IPR000717 | - | |
Cma10g01147 | 968 | Coils | Coil | 561 | 600 | - | - | |
Cma10g01147 | 968 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 943 | IPR027512 | GO:0005852 | |
Cma10g01147 | 968 | MobiDBLite | consensus disorder prediction | 815 | 861 | - | - | |
Cma10g01147 | 968 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 910 | IPR027512 | GO:0005852 | |
Cma10g01147 | 968 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 441 | 532 | - | - | |
Cma10g01147 | 968 | Coils | Coil | 669 | 696 | - | - | |
Cma10g01147 | 968 | Coils | Coil | 93 | 120 | - | - | |
Cma10g01147 | 968 | Gene3D | - | 362 | 494 | - | - | |
Cma10g01147 | 968 | Gene3D | - | 269 | 343 | - | - | |
Cma10g01147 | 968 | MobiDBLite | consensus disorder prediction | 949 | 968 | - | - | |
Cma10g01147 | 968 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A | 1 | 910 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma10g01147 | Cma-Chr10:8114322 | Cma11g01248 | Cma-Chr11:8299443 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma10g01147 | K03254 | - | csv:101209344 | 1502.65 |