Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma10g01190 ATGAGGGAGGAGCCTGGGGTTTGTGCGGTGCCGCCTGGTATTGGTGCTTCGGATCCCACGGTCAGAAATGCATTGCCTTTTACCAAATGGGTTCACGCCTTAAACCCCTACAATCTCTCTGATTCTACTCTCTTCGACTCTTATGAAACTTCCTTTGCTGCTACCCTTACTCCTCTCATGGTGGGACTCACTCTCATTCAAGGAGCAGATACAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCAGGATATCACCTGCATCGTGGATATGGGTCTGGAGCAAAAAGCTGGCTTCTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGGAAAACAACAAGGCGTGGCTCGTCAAAATTTATGGAGAAGCAGATACCATTTACAGGAATTCTGAGTAACAAAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTGAAGGTTCGTTACTGTGATGGCGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGATGGCTGCTATGGAAGCATTGAAGGCCGAGGGAATGCGTTTTGCTGAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTCGAGACTTATTTCCCAAAACTACTAAAGTGAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGACTGATATATCTGGTGGCCACTACATTAGAAACTTATTTGGTGGTGTGGTGGGCTTGCAGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAAAACCCCACTGTTTCTAGTGAACGCAGCATACGATTCCTGGCAGCTACAATCTAGTATAGCTCCACCTTCTGTGGATCCGGCTGGGCAATGGCACGATTGTAGGCTGAATTATGCAAAATGTAGCCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTAGATGCTGTTCGGGATTTCTCAAAATCTTCAGAAAATGGGTTATTTATTAATTCATGCTTTGCTCACTGCCAATCTGAGAGACAGGATACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCCGTTGGAGATTGGTACTTCGACCGAGCAGCAGTGAAAGCAGTTGATTGCCCTTATCCTTGCGACACCACTTGCCACCATCTGGTTTTCAGAGCCGCTTAG 1227 45.15 MREEPGVCAVPPGIGASDPTVRNALPFTKWVHALNPYNLSDSTLFDSYETSFAATLTPLMVGLTLIQGADTKQAVCLDGTLPGYHLHRGYGSGAKSWLLQLEGGGWCNNIRNCVYRKTTRRGSSKFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWMAAMEALKAEGMRFAEQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQCFFPQNLIAGIKTPLFLVNAAYDSWQLQSSIAPPSVDPAGQWHDCRLNYAKCSQPQIQFLQGFRNQMLDAVRDFSKSSENGLFINSCFAHCQSERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAVDCPYPCDTTCHHLVFRAA 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8792600 8801272 - CmaCh10G011900.1 Cma10g01190 302506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma10g01190 408 PANTHER NOTUM-RELATED 59 406 IPR004963 GO:0016787
Cma10g01190 408 PANTHER PECTIN ACETYLESTERASE 2 59 406 - -
Cma10g01190 408 Pfam Pectinacetylesterase 58 385 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g01190 Cma-Chr10:8792600 Cma11g01184 Cma-Chr11:6960985 0 dispersed
Cma10g01190 Cma-Chr10:8792600 Cma16g00513 Cma-Chr16:2635616 5.74E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma10g01190 K19882 - csv:101218273 736.873